Gene detail

Detail information of GWHGAAZE011866

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011088709.1	1.1105E-143	PREDICTED: putative receptor-like protein kinase At5g39000 isoform X2 [Sesamum indicum]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	2E-104	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A022RZ14\|A0A022RZ14_ERYGU	6E-138	Uncharacterized protein {ECO:0000313\|EMBL:EYU44215.1}
TAIR10	AT3G51550.1	8E-94	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	74369440	74371723	+
GWHAAZE00000003	mRNA	74369440	74371723	+
GWHAAZE00000003	exon	74369440	74370903	+
GWHAAZE00000003	exon	74371073	74371723	+
GWHAAZE00000003	CDS	74369440	74370903	+
GWHAAZE00000003	CDS	74371073	74371723	+

Transcript Sequence
>GWHTAAZE011878 ATGGTTGTTACTCGAGTTTCGATTCTACTCGTCTTCGTCTCCATCTTCTTCATCCATAATACATTTTTTAGCTATGCAAATAAGCTCACAACTCCAAATTCCCCAATTGAAAACCTTCCTGTCTATAACAAGTACTTATACCCCGAGCCATCGACTCCAAAACCGCGAAAATGGGTGACTTTTGGCTGGGGGAACACGATTGCAACTGGTTTGATACTCGTAATCACACTGTTAAATATCATTGTTTATAAGTTGAGGGAAATTCAGGAATCAAATCTTGACGAGGAACTAAACTTACCGTCATCATTGCCGTCAGAACGGTCATGTCGTCGCTTTTCACTAGCCGAAATCTTATTGGCTACACATAACTTTAGTGATGAATTGGTCCTTGGGCGAGGTGGATTTGGAAAAGTGTACAAAGGGGTTATTGACAATGGGACAGTTACGGTTGCCATTAAGCGGTTGAATCATATGTCCAAACAAGGATCGCGCGAATTCTGGAACGAAATCGAGATGTTGTCCAAGTTTCGACATAGTCATCTTGTCTCGCTAATTGGGTATTGTAACGTTGGGAAAGAGAAGATTATTGTTTATGAATACATGGTCAACGGAACCTTAGCCGATCATTTGCACAAAAAAGGTACAAATGTTAGCAGCGGTAATTCGACTCTATCTTGGGTTCAACGGCTCAAAATTTGCATTGGAGCTGCACATGGATTGGACTATCTTCATACTGGCACGGGTGTTATAGATAGAGTTATACATCGTGATGTGAAGAGTTCAAACATACTACTGGATGCGAATTTTGCGGCTAGGATTTCAGACTTTGGGATGTCTAAGATAGGTCCGGCTAATACAACAATTACCAATGTAAGTACTAATGTCAAAGGAACATTCGGGTACGTGGATCCGGAATATTTCTTGACCCGTAAGTTAACTAGGAAATCAGACGTTTATTCCTTTGGGGTTGTATTGTTTGAAGTTTTATGTGGGAGACCGGTCATCGATTTGAGACTTGATGATGAGCAAAAGGGACTTGCCGGATGGGCTCAACAAAACATCAGAGAAGGGACACTCGATCAAATTATCGACCGGAGCTTGAGTGGGCAAATCTTGCCCGATTCGTTGAAAACATTTGCCCAAATAGCGGATCAATGCTTGCATATGTTTTCAAAAAACCGTCCCACAATGGCTGAGGTTGTAGTCTCGCTTGAGCTTGCGTTGGGATTGCAAGATAGAGTAGAATATTCTTTTGATTTTGGGGAATTTTTGACTGAAAACCAAGAGAATTTGGATTCTCCTTTGGAAAATGAAGGCATTATCAATCTTCAAAATGATTTGCAACAGCAGGACCAAATGGGTGAGATTATACAGCCAGGTGATGCAAGAAATGAACATCCTCATGCAAAGCCCATCAAGAAAACAGTGTTGACTAGGATCTTACAGCAGGCTTTTACGGCTCGACGTGTCAATAATTCAAAATTTTCTTCTCCCCCCAACCCCTCGGTGGGCATTTATCAGGCCATAGTGATCCAAAAAGTCACAAAGAACAGCAAAAGTAGCATAAAGAAGGTCAGGAAGAACAAGGCATTTCCAAGCAAAGATGTACATGTTGCCCCCGGGGCTCTTCCGAGTGGGCAAATAACAACTTCATTTTTAGGAGAAGTATTTACATATCAGCAGATTCTACAAGCCACAGGTGAATTCAATAATATAAACCTCCTTAAAAATGGCCATTCAGGTGGCCTATTCCGGGGTATCCTGGAAGGTGGGGTTCCTGTAGTGATCAAAAGGATTGATTTGGGTTCTGTCAAGAAGGAACCTTACATGCTCGAGTTGGATGCTTTCAATAAGGTTTCTCATTCCAGATTTGTCCCCCTCCTAGGGCATTGCATGGAAAATGAGAATGAGAAGTTTCTGATTTACAAATATATGCCGAATGGGGATTTGTCAAGTTCTTTATTTAGGAAAACCAATTTTGAGGATGATACATTATCGTCATTGGACTGGATAACGAGGCTAAAAATTGCTATAGGAGTGGCAGAGGGTCTGTCTTATCTGCATCATGAATGTACTCCACCCCTTGTTCACAGGTATTACGTATTGCTATTTTGA

Network for GWHGAAZE011866

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	129	403	5.30E-48
PF07714.18	PK_Tyr_Ser-Thr	573	698	1.00E-11

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0004674	molecular_function	protein serine/threonine kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.011
	SRR8316897	Juvenile bud stage	0.034
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.029
	SRR8316901	Third green stage	0.008
	SRR8316898	Complete white stage	0.069
	SRR8316899	Complete white stage	0.061
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.009
	SRR8316904	Silver flowering stage	0.043
	SRR8316905	Silver flowering stage	0.067
	SRR8316906	Gold flowering stage	0.073
	SRR8316907	Gold flowering stage	0.017
	SRR8316908	Gold flowering stage	0.032
SRP132670	SRR6706286	Control	0.254
	SRR6706287	Light intensity 50%	0.184
	SRR6706288	Light intensity 20%	0.095
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.019
	CNS0095593	Slightly white alabastrum(diploid) 2	0.024
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.120
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.085
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.010
	CNS0095600	Silvery flower (diploied) 3	0.002
	CNS0095601	Golden flower (diploid) 1	0.001
	CNS0095602	Golden flower (diploid) 2	0.010
	CNS0095603	Golden flower (diploid) 3	0.012
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.001
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.006
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.016
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.061
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.057
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.008
	CRR073307	Third green 2	0.060
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.117
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.004
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.196
	CRR073319	Tawny withering 2	0.274
	CRR073320	Tawny withering 3	0.023