Gene detail

Detail information of GWHGAAZE011864

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU22225.1	1.13744E-61	hypothetical protein MIMGU_mgv1a017857mg, partial [Erythranthe guttata]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	2E-46	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|M0RU06\|M0RU06_MUSAM	5E-65	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P20760_001}
TAIR10	AT3G51550.1	9E-44	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	74331085	74334634	+
GWHAAZE00000003	mRNA	74331085	74334634	+
GWHAAZE00000003	exon	74331085	74331840	+
GWHAAZE00000003	exon	74332066	74332561	+
GWHAAZE00000003	exon	74334216	74334634	+
GWHAAZE00000003	CDS	74331085	74331840	+
GWHAAZE00000003	CDS	74332066	74332561	+
GWHAAZE00000003	CDS	74334216	74334634	+

Transcript Sequence
>GWHTAAZE011876 ATGGTTGTTACTCAAATTTCGATTCTACTCGTCTTTGTCTCTATCTTCTTCCTCCATAATCCATTGTTCAGCTACGCAAATAAGCTCCCAACTCCATATTCCCCTGTCGAAAACAGTCCCATCTATAACAAGTACTTATACCCCGAGCCATCGACTCCAAGGCCACGGAAATGGTTGACTTTTGGCCGGGGGAACACAATTGCAACTTGTTTGATACTTGTAATCACACTGTTAAATATTATTGTCTTTAAGTTGCGGGAAATTCAGGAAGCAAATCTTGATAAGGAAGTAAATTTACCGTCGTCTTTGCCGTCAGAAAGATCAGGCCGTCGCTTTTCACTAGCTGAAATCTTACTGACCACACATAACTTTAGCAACGAATTGGCCCTTGGGCAAGGCGGATTTGGAAAAGTCTACAAAGGGGTCATAGACAACGGAACTGTTACGGTTGCCATTAAGCGGTTGAATCAAATGTCCAAACAAGGAGCACGTGAATTTTGGAACGAAATTGAGATGCTGTCCAAGTTTCGACACAGTCATCTCGTCTCACTAATTGGGTACTGTAACATTGGGAAAGAGATGATCATCGTGTATGAATACATGGCCAATGGAACCTTAGCCGATCATTTGCACAAAAAAGTTACAAATGGTAGCAGCAGTACTTCGACTCTGTCTTGGGTTCAACGGCTCAAAATTTGCATCGGGGCTGCACGTGGATTGGATTATCTTCATACTGGCACTGGTGTTGTAGAAAGAGTGTTGTGTGGGAGACCGGTCATCGATTCGAGACTTGATCCTGAGCAACAGGGACTTGCTGGATGGGCTCAACAAAACATCAAAGAAGGGACACTAAATCAAATTATTGACCCGCACTTGACAGGGCAAATCTTGCCCGATTCGTTGAAAACGTTTGCACAAATAGCGGATCAATGCCTGCATATGTTTTCGAAAAACCGTCCCACGATGGCCGAGGTTGTAGTCTCACTTGAGCTTGCTTTGGCATTGCAAGAGAGAGTAGATTCTTTTGTTTTTGAGGATTTTTTCACTGAAACCCAAGAGAATTCGATTTCTGCTTTTGAAAATGAAGGCACTGCCAATCTTCAAAACAATTTGCAACCGCAGGACCAAATGGATGAGATTACACAGCGAGGTGTTGCAAGAAACGAACATCCTCGTGAAAAGCCCGTCAAGAAAACGGCATTGACTAGGATCGTACGGCAGGCTTTACTGGGAACGGCTCGGGTGATCTCAGGGAAGAAATTGCCGAAGGTGAAAAGAACCTCTCGACACTCCAATGCCAATAACAAAGATGAAATGGCGACTGTAGGGAACAAACAATTTGATGCTAATGTAGGCAGCTGTCTTAACAAAGAGGAAACAGCAAGTACTTGGAGCAGAGAAGAGAAGGTGAACAGAATTTTCCAACTTTTTGATGCCAATCGAGATGGCGGTCTTGGCCCAAGGGAATTGGCAGCACTTTTAGCCGCTGTATACCCTAGAGTCAAATTCAGTGATGTTCAAATTGAAGCAATGATTGAGGACGTCTATCGGACCTATGATGAATTTGTCGATGGTGAAAAAGGTCTCACTTTTAGTGGGCTTTTGCAAACCTACAATGATGGCGCTGGGGACCCTGATCAAGATTTCGATACACTCGGACTTGAACTTTAG

Network for GWHGAAZE011864

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	129	259	4.00E-25

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0005509	molecular_function	calcium ion binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.639
	SRR3591706	second leaf	0.282
	SRR3591707	mature leaf	0.167
	SRR3591708	Shoot apex	0.412
	SRR3591709	Stem	1.028
	SRR3591710	White floral bud	0.421
	SRR3591711	White flower	0.340
	SRR3591712	Green floral bud	0.332
	SRR3591713	Yellow flower	0.084
SRP173429	SRR8316895	Juvenile bud stage	0.026
	SRR8316896	Juvenile bud stage	0.130
	SRR8316897	Juvenile bud stage	0.085
	SRR8316894	Third green stage	0.056
	SRR8316900	Third green stage	0.065
	SRR8316901	Third green stage	0.011
	SRR8316898	Complete white stage	0.026
	SRR8316899	Complete white stage	0.047
	SRR8316903	Complete white stage	0.075
	SRR8316902	Silver flowering stage	0.022
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.041
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.102
	SRR8316908	Gold flowering stage	0.064
SRP132670	SRR6706286	Control	0.121
	SRR6706287	Light intensity 50%	0.131
	SRR6706288	Light intensity 20%	0.008
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.174
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.044
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.194
	CNS0095597	Whole white alabastrum(diploid) 4	0.020
	CNS0095598	Silvery flower (diploied) 1	0.123
	CNS0095599	Silvery flower (diploied) 2	0.174
	CNS0095600	Silvery flower (diploied) 3	0.052
	CNS0095601	Golden flower (diploid) 1	0.028
	CNS0095602	Golden flower (diploid) 2	0.132
	CNS0095603	Golden flower (diploid) 3	0.076
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.328
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.390
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.231
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.245
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.220
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.294
	CNS0095610	Silvery flower (tetraploid) 1	0.297
	CNS0095611	Silvery flower (tetraploid) 2	0.089
	CNS0095612	Silvery flower (tetraploid) 3	0.137
	CNS0095613	Golden flower (tetraploid) 1	0.053
	CNS0095614	Golden flower (tetraploid) 2	0.117
	CNS0095615	Golden flower (tetraploid) 3	0.047
CRA001975	CRR073297	Stem 1	0.022
	CRR073298	Stem 2	0.011
	CRR073299	Stem 3	0.077
	CRR073300	Leaf 1	0.048
	CRR073301	Leaf 2	0.041
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.018
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.047
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.050
	CRR073313	Silver flowering 2	0.371
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.004
	CRR073316	Gold flowering 2	0.035
	CRR073317	Gold flowering 3	0.281
	CRR073318	Tawny withering 1	0.120
	CRR073319	Tawny withering 2	0.987
	CRR073320	Tawny withering 3	0.058