Detail information of GWHGAAZE011630


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009597949.10PREDICTED: casein kinase I-like isoform X2 [Nicotiana tomentosiformis]
Swissprottr|P42158|KC1D_ARATH0Casein kinase I isoform delta-like
trEMBLtr|K4CW51|K4CW51_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc09g090250.2.1}
TAIR10AT4G14340.10casein kinase I

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene6922721669238269-
GWHAAZE00000003mRNA6922721669238269-
GWHAAZE00000003exon6923819469238269-
GWHAAZE00000003exon6923804669238086-
GWHAAZE00000003exon6923676569236834-
GWHAAZE00000003exon6923648969236637-
GWHAAZE00000003exon6923630069236395-
GWHAAZE00000003exon6923465869234728-
GWHAAZE00000003exon6923336969233430-
GWHAAZE00000003exon6923322769233290-
GWHAAZE00000003exon6923305269233136-
GWHAAZE00000003exon6923265669232782-
GWHAAZE00000003exon6923203169232107-
GWHAAZE00000003exon6923186269231922-
GWHAAZE00000003exon6923011969230225-
GWHAAZE00000003exon6922721669227488-
GWHAAZE00000003CDS6923819469238269-
GWHAAZE00000003CDS6923804669238086-
GWHAAZE00000003CDS6923676569236834-
GWHAAZE00000003CDS6923648969236637-
GWHAAZE00000003CDS6923630069236395-
GWHAAZE00000003CDS6923465869234728-
GWHAAZE00000003CDS6923336969233430-
GWHAAZE00000003CDS6923322769233290-
GWHAAZE00000003CDS6923305269233136-
GWHAAZE00000003CDS6923265669232782-
GWHAAZE00000003CDS6923203169232107-
GWHAAZE00000003CDS6923186269231922-
GWHAAZE00000003CDS6923011969230225-
GWHAAZE00000003CDS6922721669227488-
Transcript Sequence

Network for GWHGAAZE011630

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase102281.40E-25
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCK1_CK1

KEGG pathway

KO Enzyme pathway mapID
K08960CSNK1E Wnt signaling pathway map04310
Hedgehog signaling pathwaymap04340
Hedgehog signaling pathway - flymap04341
Hippo signaling pathwaymap04390
Hippo signaling pathway - flymap04391
Hippo signaling pathway - multiple speciesmap04392
FoxO signaling pathwaymap04068
Circadian rhythmmap04710
Circadian rhythm - flymap04711

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf74.754
SRR3591706second leaf45.152
SRR3591707mature leaf47.250
SRR3591708Shoot apex63.229
SRR3591709Stem68.135
SRR3591710White floral bud93.114
SRR3591711White flower86.966
SRR3591712Green floral bud75.998
SRR3591713Yellow flower75.118
SRP173429 SRR8316895Juvenile bud stage 42.440
SRR8316896Juvenile bud stage 44.583
SRR8316897Juvenile bud stage 21.976
SRR8316894Third green stage 22.725
SRR8316900Third green stage 61.723
SRR8316901Third green stage 64.502
SRR8316898Complete white stage 35.482
SRR8316899Complete white stage 93.185
SRR8316903Complete white stage 59.581
SRR8316902Silver flowering stage36.284
SRR8316904Silver flowering stage48.439
SRR8316905Silver flowering stage20.667
SRR8316906Gold flowering stage 77.348
SRR8316907Gold flowering stage 74.892
SRR8316908Gold flowering stage 84.575
SRP132670SRR6706286Control39.044
SRR6706287Light intensity 50%40.184
SRR6706288Light intensity 20%44.850
CNP0000432CNS0095592Slightly white alabastrum(diploid) 147.126
CNS0095593Slightly white alabastrum(diploid) 247.394
CNS0095594Slightly white alabastrum(diploid) 342.034
CNS0095595Whole white alabastrum(diploid) 231.589
CNS0095596Whole white alabastrum(diploid) 336.112
CNS0095597Whole white alabastrum(diploid) 438.430
CNS0095598Silvery flower (diploied) 144.324
CNS0095599Silvery flower (diploied) 242.751
CNS0095600Silvery flower (diploied) 365.164
CNS0095601Golden flower (diploid) 138.601
CNS0095602Golden flower (diploid) 261.465
CNS0095603Golden flower (diploid) 360.974
CNS0095604Slightly white alabastrum(tetraploid) 149.903
CNS0095605Slightly white alabastrum(tetraploid) 240.644
CNS0095606Slightly white alabastrum(tetraploid) 372.763
CNS0095607Whole white alabastrum(tetraploid) 127.816
CNS0095608Whole white alabastrum(tetraploid) 230.381
CNS0095609Whole white alabastrum(tetraploid) 354.754
CNS0095610Silvery flower (tetraploid) 173.094
CNS0095611Silvery flower (tetraploid) 266.776
CNS0095612Silvery flower (tetraploid) 392.770
CNS0095613Golden flower (tetraploid) 154.907
CNS0095614Golden flower (tetraploid) 272.058
CNS0095615Golden flower (tetraploid) 382.186
CRA001975CRR073297Stem 152.116
CRR073298Stem 246.582
CRR073299Stem 344.259
CRR073300Leaf 143.448
CRR073301Leaf 246.527
CRR073302Leaf 339.421
CRR073303Juvenile bud 146.350
CRR073304Juvenile bud 240.338
CRR073305Juvenile bud 347.376
CRR073306Third green 145.679
CRR073307Third green 237.010
CRR073308Third green 342.076
CRR073309Second white 145.477
CRR073310Second white 252.682
CRR073311Second white 354.006
CRR073312Silver flowering 146.415
CRR073313Silver flowering 243.539
CRR073314Silver flowering 352.126
CRR073315Gold flowering 124.981
CRR073316Gold flowering 242.492
CRR073317Gold flowering 320.392
CRR073318Tawny withering 160.499
CRR073319Tawny withering 258.863
CRR073320Tawny withering 357.814