Detail information of GWHGAAZE011333


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO43623.10hypothetical protein CISIN_1g0102001mg, partial [Citrus sinensis]
trEMBLtr|A0A067DL73|A0A067DL73_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO43623.1} (Fragment)
TAIR10AT3G24200.21E-145FAD/NAD(P)-binding oxidoreductase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene5787710357881097-
GWHAAZE00000003mRNA5787710357881097-
GWHAAZE00000003exon5788103057881097-
GWHAAZE00000003exon5788089057880941-
GWHAAZE00000003exon5787919757879370-
GWHAAZE00000003exon5787743157878009-
GWHAAZE00000003exon5787710357877318-
GWHAAZE00000003CDS5788103057881097-
GWHAAZE00000003CDS5788089057880941-
GWHAAZE00000003CDS5787919757879370-
GWHAAZE00000003CDS5787743157878009-
GWHAAZE00000003CDS5787710357877318-
Transcript Sequence

Network for GWHGAAZE011333

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01494.20FAD_binding_32363082.90E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06126COQ6 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130

Gene Ontology

GO term OntologyName
GO:0006744biological_processubiquinone biosynthetic process
GO:0055114biological_processoxidation-reduction process
GO:0016709molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0050660molecular_functionflavin adenine dinucleotide binding
GO:0071949molecular_functionFAD binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.095
SRR3591706second leaf11.471
SRR3591707mature leaf12.112
SRR3591708Shoot apex20.270
SRR3591709Stem15.549
SRR3591710White floral bud10.512
SRR3591711White flower13.310
SRR3591712Green floral bud18.064
SRR3591713Yellow flower11.365
SRP173429 SRR8316895Juvenile bud stage 7.028
SRR8316896Juvenile bud stage 13.368
SRR8316897Juvenile bud stage 0.318
SRR8316894Third green stage 5.032
SRR8316900Third green stage 12.808
SRR8316901Third green stage 14.941
SRR8316898Complete white stage 3.613
SRR8316899Complete white stage 10.329
SRR8316903Complete white stage 7.526
SRR8316902Silver flowering stage3.686
SRR8316904Silver flowering stage5.755
SRR8316905Silver flowering stage2.596
SRR8316906Gold flowering stage 6.897
SRR8316907Gold flowering stage 7.786
SRR8316908Gold flowering stage 4.079
SRP132670SRR6706286Control9.652
SRR6706287Light intensity 50%10.620
SRR6706288Light intensity 20%11.186
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.371
CNS0095593Slightly white alabastrum(diploid) 213.465
CNS0095594Slightly white alabastrum(diploid) 312.520
CNS0095595Whole white alabastrum(diploid) 211.612
CNS0095596Whole white alabastrum(diploid) 313.464
CNS0095597Whole white alabastrum(diploid) 411.493
CNS0095598Silvery flower (diploied) 16.366
CNS0095599Silvery flower (diploied) 28.180
CNS0095600Silvery flower (diploied) 32.794
CNS0095601Golden flower (diploid) 14.604
CNS0095602Golden flower (diploid) 23.957
CNS0095603Golden flower (diploid) 33.582
CNS0095604Slightly white alabastrum(tetraploid) 10.264
CNS0095605Slightly white alabastrum(tetraploid) 20.411
CNS0095606Slightly white alabastrum(tetraploid) 30.835
CNS0095607Whole white alabastrum(tetraploid) 10.697
CNS0095608Whole white alabastrum(tetraploid) 20.947
CNS0095609Whole white alabastrum(tetraploid) 30.441
CNS0095610Silvery flower (tetraploid) 10.530
CNS0095611Silvery flower (tetraploid) 20.344
CNS0095612Silvery flower (tetraploid) 30.112
CNS0095613Golden flower (tetraploid) 10.253
CNS0095614Golden flower (tetraploid) 20.115
CNS0095615Golden flower (tetraploid) 30.064
CRA001975CRR073297Stem 112.035
CRR073298Stem 210.753
CRR073299Stem 38.305
CRR073300Leaf 113.443
CRR073301Leaf 215.349
CRR073302Leaf 38.597
CRR073303Juvenile bud 18.256
CRR073304Juvenile bud 24.465
CRR073305Juvenile bud 38.345
CRR073306Third green 12.393
CRR073307Third green 21.971
CRR073308Third green 31.691
CRR073309Second white 13.777
CRR073310Second white 23.229
CRR073311Second white 31.470
CRR073312Silver flowering 12.540
CRR073313Silver flowering 21.658
CRR073314Silver flowering 32.441
CRR073315Gold flowering 13.727
CRR073316Gold flowering 26.367
CRR073317Gold flowering 32.277
CRR073318Tawny withering 16.537
CRR073319Tawny withering 26.896
CRR073320Tawny withering 36.530