Detail information of GWHGAAZE011326


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006468992.10PREDICTED: shaggy-related protein kinase zeta-like [Citrus sinensis]
Swissprottr|Q39010|KSG6_ARATH0Shaggy-related protein kinase zeta
trEMBLtr|A0A067FIX3|A0A067FIX3_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO63402.1}
TAIR10AT2G30980.10SHAGGY-related protein kinase dZeta

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene5702090657027419-
GWHAAZE00000003mRNA5702090657027419-
GWHAAZE00000003exon5702729357027419-
GWHAAZE00000003exon5702571457025806-
GWHAAZE00000003exon5702536857025427-
GWHAAZE00000003exon5702501157025283-
GWHAAZE00000003exon5702485657024930-
GWHAAZE00000003exon5702471857024774-
GWHAAZE00000003exon5702332957023469-
GWHAAZE00000003exon5702316957023219-
GWHAAZE00000003exon5702298357023078-
GWHAAZE00000003exon5702232657022409-
GWHAAZE00000003exon5702183357021934-
GWHAAZE00000003exon5702090657021001-
GWHAAZE00000003five_prime_UTR5702738657027419-
GWHAAZE00000003CDS5702729357027385-
GWHAAZE00000003CDS5702571457025806-
GWHAAZE00000003CDS5702536857025427-
GWHAAZE00000003CDS5702501157025283-
GWHAAZE00000003CDS5702485657024930-
GWHAAZE00000003CDS5702471857024774-
GWHAAZE00000003CDS5702332957023469-
GWHAAZE00000003CDS5702316957023219-
GWHAAZE00000003CDS5702298357023078-
GWHAAZE00000003CDS5702232657022409-
GWHAAZE00000003CDS5702183357021934-
GWHAAZE00000003CDS5702090657021001-
Transcript Sequence

Network for GWHGAAZE011326

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase663504.50E-64
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_GSK

KEGG pathway

KO Enzyme pathway mapID
K14502BIN2 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf39.732
SRR3591706second leaf15.241
SRR3591707mature leaf14.975
SRR3591708Shoot apex25.741
SRR3591709Stem39.245
SRR3591710White floral bud19.654
SRR3591711White flower17.689
SRR3591712Green floral bud29.018
SRR3591713Yellow flower11.205
SRP173429 SRR8316895Juvenile bud stage 19.805
SRR8316896Juvenile bud stage 25.783
SRR8316897Juvenile bud stage 13.194
SRR8316894Third green stage 10.784
SRR8316900Third green stage 31.578
SRR8316901Third green stage 28.417
SRR8316898Complete white stage 10.064
SRR8316899Complete white stage 53.156
SRR8316903Complete white stage 13.704
SRR8316902Silver flowering stage5.586
SRR8316904Silver flowering stage8.210
SRR8316905Silver flowering stage4.089
SRR8316906Gold flowering stage 17.116
SRR8316907Gold flowering stage 17.296
SRR8316908Gold flowering stage 15.969
SRP132670SRR6706286Control37.130
SRR6706287Light intensity 50%36.893
SRR6706288Light intensity 20%44.266
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.914
CNS0095593Slightly white alabastrum(diploid) 220.983
CNS0095594Slightly white alabastrum(diploid) 316.931
CNS0095595Whole white alabastrum(diploid) 215.826
CNS0095596Whole white alabastrum(diploid) 313.590
CNS0095597Whole white alabastrum(diploid) 412.599
CNS0095598Silvery flower (diploied) 123.803
CNS0095599Silvery flower (diploied) 221.762
CNS0095600Silvery flower (diploied) 325.864
CNS0095601Golden flower (diploid) 115.733
CNS0095602Golden flower (diploid) 220.737
CNS0095603Golden flower (diploid) 322.533
CNS0095604Slightly white alabastrum(tetraploid) 127.975
CNS0095605Slightly white alabastrum(tetraploid) 218.268
CNS0095606Slightly white alabastrum(tetraploid) 349.071
CNS0095607Whole white alabastrum(tetraploid) 118.078
CNS0095608Whole white alabastrum(tetraploid) 212.987
CNS0095609Whole white alabastrum(tetraploid) 330.701
CNS0095610Silvery flower (tetraploid) 121.103
CNS0095611Silvery flower (tetraploid) 227.744
CNS0095612Silvery flower (tetraploid) 313.737
CNS0095613Golden flower (tetraploid) 17.645
CNS0095614Golden flower (tetraploid) 214.933
CNS0095615Golden flower (tetraploid) 36.380
CRA001975CRR073297Stem 135.969
CRR073298Stem 232.250
CRR073299Stem 334.584
CRR073300Leaf 140.171
CRR073301Leaf 240.042
CRR073302Leaf 338.977
CRR073303Juvenile bud 143.319
CRR073304Juvenile bud 231.144
CRR073305Juvenile bud 349.047
CRR073306Third green 11.731
CRR073307Third green 22.521
CRR073308Third green 34.160
CRR073309Second white 14.974
CRR073310Second white 24.003
CRR073311Second white 32.067
CRR073312Silver flowering 11.322
CRR073313Silver flowering 20.645
CRR073314Silver flowering 31.596
CRR073315Gold flowering 115.791
CRR073316Gold flowering 214.964
CRR073317Gold flowering 320.806
CRR073318Tawny withering 133.556
CRR073319Tawny withering 231.850
CRR073320Tawny withering 331.997