Gene detail

Detail information of GWHGAAZE011321

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU44220.1	3.4103E-110	hypothetical protein MIMGU_mgv1a003782mg [Erythranthe guttata]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	4E-103	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A022RZ18\|A0A022RZ18_ERYGU	1E-110	Uncharacterized protein {ECO:0000313\|EMBL:EYU44220.1}
TAIR10	AT3G51550.1	3E-92	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	56907337	56909783	+
GWHAAZE00000003	mRNA	56907337	56909783	+
GWHAAZE00000003	exon	56907337	56908441	+
GWHAAZE00000003	exon	56909044	56909783	+
GWHAAZE00000003	CDS	56907337	56908441	+
GWHAAZE00000003	CDS	56909044	56909783	+

Transcript Sequence
>GWHTAAZE011333 ATGATGCCGGTACCACCACCGCCGGAGCACTTAAACACGCTATCGTTGGCTCCGCCGGAGCAAGTATGCCGTCCCTTCTCTCTTGATGAGATCTTATCCGCGACTAACAACTTCGACGAGTCATTGGTTATCGGGCAGGGCGGGTTTGGTAAAGTATACAAAGGTATCATTGACAACGGGGCAAGTATCGTCGCTATAAAACGGCTAAATTCCGCGTCCAAGCAAGGAGATTCAGAATTCAAAGCCGAGATTGAGATGCTTTCAAAATTTCGACACACTCATATTGTGTCTCTACTCGGTTATTGTTATAGTTCCGCGGAAAGGATCCTTATTTATGAATATATGGCCAACGGGTCTTTGGCAGATAACTTGTACAAAATTGGGAAGTGTAGTAGTGGTTCTACTTTATCTTGGGTGCAGCGTCTCAAGATTTGTTTAGGTGCTGCTCGCGGCTTGGATTACCTCCATACAGGTGTTCAAGATGGTGTCATACATCGTGATATGAAGAGTTCGAACATTCTGTTAGATAAGAACTGCGCTGCTAAAGTTTCAGACTTTGGGTTGTCTAGAATCAGCCCAATCGATCCTTCATGCACTCATATCAGCACAAAGGTTAAAGGGACAACGGGGTATGTAGATCCAGAATATATGCTGACCTTCAAATTGACAGTGAAATCCGATGTCTACTCTTTCGGGGTTGTCCTATTTGAAGTTTTGTGCGGAAGACGAGCGGTGGATTTTAGACTTCATGAAGAGCAATGGAGTCTTGCTAGTTGGGCCCAACTCTGTATTGAAAAAGGAACACTTCATGGTATTATTGATCCTGATTTGAAGTGGGAAATCTTGCCGGAATCTTTGACAGAGTACGCAAGAATTGCAAATCAATGTTTACGTTATCAGTCAAAAAAACGCCCTACGATGACTCAAGTCGTGGGCTCACTCGAGTTGGCGTTGGCATTGCAACTAGGACATAAAGATTCTTCCGCATTTGAAATGGAAATTGTTTGTACAAGTGAGGCAGATGAAATCATAGAAAAGGTTGATTCAACGATGGTACAAGAACAAATGCAAGACTCTATGTTTTCGACAGTTGATGACACATCAGTTCTTGAAGAACCTTCGTCCTCCTTCTCCGAGGCTGCAGATGATAATCCATTACCAGCAGTGGAGGGTCTCCAAATTTCAGGTGAACCATTTCCGGGACGGGTGCTATGCGCGAGAGGATACTCTTTTAACAAAACAAGAAGTGAATTTTCGTGGGTGCGCCATTTTGAAAATGGAACTGTTGTGTTACTTGTGTATATAGATGGGGCAAATCATCCAAGCTATCTTGTTACAGCGGATGACGTTGATACATACCTTGCCATTGAAGTCGTGCCAAGGGATGACAGAAATCGAAGGGGTGAACCCATAAAGGTCTTTGCCAACGAGAATAGAAAGATCACTTGTGGTCCAGAATTGCATAAACACATACAGAGGAACCTTTATAACGGCCATGCTAAGTATCGAATAACCCTGCCGACAACATATAATGGGATATGGGAGCCAGCTAAATTGGTGATCAAGCGCGAAGGTTATAGCATCAAGCGTAACGAATTTAGTGCTGCTATAGTCATTGAGAAATTCTCACCATCCACAACAGTTACACTTGCATGTGGAAATCCTACAGAATTCACAATAACTGGTACTACTGGGGATGTTGAGTATGTTTTGCGAGCGGATGAAAAATCCCCGCAAGATATAAGCTGTTCAAGAGATGCAATTGTTCTCACCATGAGATTATTTGCCATGAAGGCCTGTGAGAAAAATAAAGGGAAGAAAAGAGGTTTATTCTTTAACAAGTAG

Network for GWHGAAZE011321

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	42	311	3.50E-48

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0005524	molecular_function	ATP binding
GO:0004672	molecular_function	protein kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.039
	SRR3591709	Stem	0.054
	SRR3591710	White floral bud	0.930
	SRR3591711	White flower	0.610
	SRR3591712	Green floral bud	3.048
	SRR3591713	Yellow flower	0.238
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.029
	SRR8316897	Juvenile bud stage	2.559
	SRR8316894	Third green stage	0.147
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.239
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.022
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.865
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.638
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.405
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.789
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.366
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.463
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.290
	CNS0095612	Silvery flower (tetraploid) 3	0.190
	CNS0095613	Golden flower (tetraploid) 1	0.175
	CNS0095614	Golden flower (tetraploid) 2	0.080
	CNS0095615	Golden flower (tetraploid) 3	0.038
CRA001975	CRR073297	Stem 1	0.092
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.003
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.156
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000