Detail information of GWHGAAZE011074


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002518104.16.97707E-26transcription factor, putative [Ricinus communis]
Swissprottr|Q9SAK5|APL_ARATH1E-16Myb family transcription factor APL
trEMBLtr|B9RWI5|B9RWI5_RICCO3E-26Transcription factor, putative {ECO:0000313|EMBL:EEF44237.1}
TAIR10AT3G24120.23E-19Homeodomain-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene4142271941422922-
GWHAAZE00000003mRNA4142271941422922-
GWHAAZE00000003exon4142271941422922-
GWHAAZE00000003CDS4142271941422922-
Transcript Sequence

Network for GWHGAAZE011074

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGARP-G2-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf36.169
SRR3591706second leaf48.137
SRR3591707mature leaf53.835
SRR3591708Shoot apex61.761
SRR3591709Stem46.481
SRR3591710White floral bud65.696
SRR3591711White flower49.775
SRR3591712Green floral bud24.660
SRR3591713Yellow flower39.253
SRP173429 SRR8316895Juvenile bud stage 19.449
SRR8316896Juvenile bud stage 20.403
SRR8316897Juvenile bud stage 13.236
SRR8316894Third green stage 7.669
SRR8316900Third green stage 20.667
SRR8316901Third green stage 23.252
SRR8316898Complete white stage 32.493
SRR8316899Complete white stage 30.193
SRR8316903Complete white stage 39.730
SRR8316902Silver flowering stage31.189
SRR8316904Silver flowering stage37.310
SRR8316905Silver flowering stage25.321
SRR8316906Gold flowering stage 96.455
SRR8316907Gold flowering stage 104.777
SRR8316908Gold flowering stage 120.022
SRP132670SRR6706286Control98.089
SRR6706287Light intensity 50%98.080
SRR6706288Light intensity 20%87.192
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.210
CNS0095593Slightly white alabastrum(diploid) 225.678
CNS0095594Slightly white alabastrum(diploid) 321.634
CNS0095595Whole white alabastrum(diploid) 218.003
CNS0095596Whole white alabastrum(diploid) 315.528
CNS0095597Whole white alabastrum(diploid) 414.604
CNS0095598Silvery flower (diploied) 151.764
CNS0095599Silvery flower (diploied) 234.318
CNS0095600Silvery flower (diploied) 347.513
CNS0095601Golden flower (diploid) 157.304
CNS0095602Golden flower (diploid) 254.716
CNS0095603Golden flower (diploid) 355.109
CNS0095604Slightly white alabastrum(tetraploid) 129.087
CNS0095605Slightly white alabastrum(tetraploid) 218.593
CNS0095606Slightly white alabastrum(tetraploid) 353.169
CNS0095607Whole white alabastrum(tetraploid) 115.762
CNS0095608Whole white alabastrum(tetraploid) 219.150
CNS0095609Whole white alabastrum(tetraploid) 333.522
CNS0095610Silvery flower (tetraploid) 147.554
CNS0095611Silvery flower (tetraploid) 249.139
CNS0095612Silvery flower (tetraploid) 384.309
CNS0095613Golden flower (tetraploid) 141.548
CNS0095614Golden flower (tetraploid) 267.220
CNS0095615Golden flower (tetraploid) 359.958
CRA001975CRR073297Stem 143.835
CRR073298Stem 232.612
CRR073299Stem 344.887
CRR073300Leaf 131.316
CRR073301Leaf 227.686
CRR073302Leaf 345.125
CRR073303Juvenile bud 129.120
CRR073304Juvenile bud 237.274
CRR073305Juvenile bud 333.663
CRR073306Third green 1239.637
CRR073307Third green 2171.765
CRR073308Third green 3157.251
CRR073309Second white 1227.354
CRR073310Second white 2214.949
CRR073311Second white 3162.242
CRR073312Silver flowering 1119.298
CRR073313Silver flowering 2161.178
CRR073314Silver flowering 388.515
CRR073315Gold flowering 144.542
CRR073316Gold flowering 250.979
CRR073317Gold flowering 360.446
CRR073318Tawny withering 127.830
CRR073319Tawny withering 228.230
CRR073320Tawny withering 336.449