Gene detail

Detail information of GWHGAAZE010768

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011077764.1	5.84723E-22	PREDICTED: dihydroneopterin aldolase 1 isoform X2 [Sesamum indicum]
Swissprot	tr\|Q9SF23\|FOLB1_ARATH	1E-14	Dihydroneopterin aldolase 1 {ECO:0000305}
trEMBL	tr\|W9RVJ2\|W9RVJ2_9ROSA	2E-20	Dihydroneopterin aldolase {ECO:0000313\|EMBL:EXC12970.1}
TAIR10	AT3G11750.1	5E-12	Dihydroneopterin aldolase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	24122467	24133060	+
GWHAAZE00000003	mRNA	24122467	24133060	+
GWHAAZE00000003	exon	24122467	24122581	+
GWHAAZE00000003	exon	24131911	24131992	+
GWHAAZE00000003	exon	24132193	24132318	+
GWHAAZE00000003	exon	24132504	24133060	+
GWHAAZE00000003	five_prime_UTR	24122467	24122581	+
GWHAAZE00000003	five_prime_UTR	24131911	24131992	+
GWHAAZE00000003	five_prime_UTR	24132193	24132241	+
GWHAAZE00000003	CDS	24132242	24132318	+
GWHAAZE00000003	CDS	24132504	24132696	+
GWHAAZE00000003	three_prime_UTR	24132697	24133060	+

Transcript Sequence
>GWHTAAZE010780 ACTCCTTTGCAAATGCATTCCAACGTCAACAGTATGAAGAAGCTCGCACTTGTATACAGAGAATGACTTACTATCAACGTGTAAATGAAGAAATTGTTAAGAAGCTTTAATTCAGCAAATGACTTGAATTATGGAAGCGAAGTAAGCAATCAAAGGGCTGACATTAGGGAGCACTCATAGTTCCTTGATCTTCTAACGTTACTGCTAGGTTAACTCGTAGGTGCAAATTGTTTGTATTGTGTGCAAATGTATAACACTCCGTATCCTTTGCCACTTTGGGAGCCAATTATGGTGGCATTTTCATCAAAAGTACACAAGTCAAACACGTTTGGCAGCATTGCTAGAGACGGCGTAGAGGGAGCGCCTCAAAATCTTTTTGAGTCTGTTGCTGAACTCATTACGTCTACAGCTCTAACCAAATTCCTGTGTATAACGGCTGTTCGCTTGAAGGTTGGGAGGCCTCATGTCGCTGTTCTCGGTCCTGTTGATTTCTTGGGAGTTGAGATTGTCAGGTAAAGAAACGTTGGTGGTGCACCAGTTTAAAAGCTATATATGCTTGTGTACTACTGGATGTTGATTGCTTTCATTTAGAGGTGGAATATATATGTGCTCTCGTCGTGTATTGATGGTGTGATGCCCAACTTTTGATTCAATTCCTGGTTCAAAGAATTTTTCTGTACAACCTAGAATTCGGAATATCAAGGCGGCTGAGATAAACACAATTTTGAAAGGAATATAGCCAGGCTGAGTGTTGTAAAGTGGATTTTAATTCCACAGAAAAGTTGGACAGCCAGAACACATTTTCCATCCTCTAACTGGATTTTTCTAGGAAAACCGTTGGTGCTCGTTTGTTTCAATTTATTTTTCTTGGAGTTAGAAA

Network for GWHGAAZE010768

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01633	folB	Metabolic pathways	map01100
K01633	folB	Folate biosynthesis	map00790

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	10.657
	SRR3591706	second leaf	9.711
	SRR3591707	mature leaf	7.808
	SRR3591708	Shoot apex	10.806
	SRR3591709	Stem	12.901
	SRR3591710	White floral bud	10.793
	SRR3591711	White flower	8.641
	SRR3591712	Green floral bud	18.158
	SRR3591713	Yellow flower	9.773
SRP173429	SRR8316895	Juvenile bud stage	5.144
	SRR8316896	Juvenile bud stage	7.748
	SRR8316897	Juvenile bud stage	3.689
	SRR8316894	Third green stage	4.333
	SRR8316900	Third green stage	12.351
	SRR8316901	Third green stage	11.574
	SRR8316898	Complete white stage	3.314
	SRR8316899	Complete white stage	14.825
	SRR8316903	Complete white stage	4.132
	SRR8316902	Silver flowering stage	3.317
	SRR8316904	Silver flowering stage	3.501
	SRR8316905	Silver flowering stage	2.156
	SRR8316906	Gold flowering stage	6.784
	SRR8316907	Gold flowering stage	4.229
	SRR8316908	Gold flowering stage	5.148
SRP132670	SRR6706286	Control	3.574
	SRR6706287	Light intensity 50%	3.962
	SRR6706288	Light intensity 20%	4.573
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	17.878
	CNS0095593	Slightly white alabastrum(diploid) 2	17.676
	CNS0095594	Slightly white alabastrum(diploid) 3	10.460
	CNS0095595	Whole white alabastrum(diploid) 2	12.034
	CNS0095596	Whole white alabastrum(diploid) 3	14.689
	CNS0095597	Whole white alabastrum(diploid) 4	13.698
	CNS0095598	Silvery flower (diploied) 1	7.600
	CNS0095599	Silvery flower (diploied) 2	8.043
	CNS0095600	Silvery flower (diploied) 3	4.652
	CNS0095601	Golden flower (diploid) 1	7.256
	CNS0095602	Golden flower (diploid) 2	7.693
	CNS0095603	Golden flower (diploid) 3	4.644
	CNS0095604	Slightly white alabastrum(tetraploid) 1	14.764
	CNS0095605	Slightly white alabastrum(tetraploid) 2	12.300
	CNS0095606	Slightly white alabastrum(tetraploid) 3	14.109
	CNS0095607	Whole white alabastrum(tetraploid) 1	11.857
	CNS0095608	Whole white alabastrum(tetraploid) 2	12.843
	CNS0095609	Whole white alabastrum(tetraploid) 3	13.934
	CNS0095610	Silvery flower (tetraploid) 1	8.231
	CNS0095611	Silvery flower (tetraploid) 2	4.692
	CNS0095612	Silvery flower (tetraploid) 3	5.236
	CNS0095613	Golden flower (tetraploid) 1	6.510
	CNS0095614	Golden flower (tetraploid) 2	9.195
	CNS0095615	Golden flower (tetraploid) 3	4.083
CRA001975	CRR073297	Stem 1	3.595
	CRR073298	Stem 2	4.212
	CRR073299	Stem 3	1.301
	CRR073300	Leaf 1	6.573
	CRR073301	Leaf 2	6.366
	CRR073302	Leaf 3	1.428
	CRR073303	Juvenile bud 1	3.685
	CRR073304	Juvenile bud 2	1.036
	CRR073305	Juvenile bud 3	1.954
	CRR073306	Third green 1	0.462
	CRR073307	Third green 2	0.084
	CRR073308	Third green 3	0.213
	CRR073309	Second white 1	0.349
	CRR073310	Second white 2	0.268
	CRR073311	Second white 3	1.103
	CRR073312	Silver flowering 1	1.043
	CRR073313	Silver flowering 2	0.173
	CRR073314	Silver flowering 3	0.426
	CRR073315	Gold flowering 1	0.929
	CRR073316	Gold flowering 2	1.040
	CRR073317	Gold flowering 3	0.100
	CRR073318	Tawny withering 1	3.489
	CRR073319	Tawny withering 2	2.382
	CRR073320	Tawny withering 3	3.754