Gene detail

Detail information of GWHGAAZE010318

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_011031489.1	PREDICTED: phosphoinositide phosphatase SAC1-like isoform X1 [Populus euphratica]
Swissprot	tr\|Q7XZU3\|SAC1_ARATH	Phosphoinositide phosphatase SAC1
trEMBL	tr\|A0A022Q2E3\|A0A022Q2E3_ERYGU	Uncharacterized protein {ECO:0000313\|EMBL:EYU22797.1}
TAIR10	AT1G22620.1	Phosphoinositide phosphatase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	3395016	3415876	+
GWHAAZE00000003	mRNA	3395016	3415876	+
GWHAAZE00000003	exon	3395016	3395159	+
GWHAAZE00000003	exon	3395257	3395461	+
GWHAAZE00000003	exon	3396482	3396647	+
GWHAAZE00000003	exon	3396953	3397175	+
GWHAAZE00000003	exon	3400570	3400646	+
GWHAAZE00000003	exon	3403626	3403813	+
GWHAAZE00000003	exon	3403944	3404041	+
GWHAAZE00000003	exon	3409052	3409185	+
GWHAAZE00000003	exon	3409262	3409396	+
GWHAAZE00000003	exon	3409489	3409873	+
GWHAAZE00000003	exon	3410002	3410196	+
GWHAAZE00000003	exon	3410889	3411010	+
GWHAAZE00000003	exon	3411280	3411390	+
GWHAAZE00000003	exon	3411729	3411926	+
GWHAAZE00000003	exon	3413962	3414153	+
GWHAAZE00000003	exon	3414943	3415051	+
GWHAAZE00000003	exon	3415628	3415876	+
GWHAAZE00000003	CDS	3395016	3395159	+
GWHAAZE00000003	CDS	3395257	3395461	+
GWHAAZE00000003	CDS	3396482	3396647	+
GWHAAZE00000003	CDS	3396953	3397175	+
GWHAAZE00000003	CDS	3400570	3400646	+
GWHAAZE00000003	CDS	3403626	3403813	+
GWHAAZE00000003	CDS	3403944	3404041	+
GWHAAZE00000003	CDS	3409052	3409185	+
GWHAAZE00000003	CDS	3409262	3409396	+
GWHAAZE00000003	CDS	3409489	3409873	+
GWHAAZE00000003	CDS	3410002	3410196	+
GWHAAZE00000003	CDS	3410889	3411010	+
GWHAAZE00000003	CDS	3411280	3411390	+
GWHAAZE00000003	CDS	3411729	3411926	+
GWHAAZE00000003	CDS	3413962	3414153	+
GWHAAZE00000003	CDS	3414943	3415051	+
GWHAAZE00000003	CDS	3415628	3415876	+

Transcript Sequence
>GWHTAAZE010330 ATGGCGAAGTCCGAGAGTTCCAAGTCCCATTCAAATCTCCCACCGTTCGTCCATCCCTCTGCCAAAATTCACCCAACCAATGATCCCGAATCCGACCCCAGCTGGTATTCGCTCGAGAAATTCAAACTCTACGAAACCAGAGCGAGGTTTTATCTAATTGGGAGTGATCGGAACAAGAGATTCTTCCGAGTGTTGAAGATTGACCGAATGGAACCATCTGATCTTAACATTAGCGAGGATCCTGTGGTGTATCCGCCACAGGAAGTGAAGAGTTTGCTCCAGCGAATTGCAGAGGGCAATCGAGCCACTGGAGGGTTGACTTTCGTTGCTAAGGTGTATGGCATTGCTGGTTGTATTAAATTCTTGGAGTCCTATTATTTAATATTGGTTACAAAGCGTCGGCAAATTGGATGTATATGTGGTCACGCGATATATAGTATTGATGAAAGCCAAATAATTACGATTCCCCATGTCTCAGTTCAAACTGATGTTGCTCATTCAAAAACTGAGCTGAGGTACAAGAAGCTTTTATCCAGTGTAGACTTGACAAAAGATTTTTTCTATAGTTACACATATCCCATAATGCGAAGTTTGCAGAAAAATGTGACGTCAATGGATGAAGGAGGAATACTATATGATAACATATTTGTGTGGAATGCTTTTCTAACGCAAGCCATTCGATCGAGATGTAAGAACACTATCTGGACAATTGCTTTGGTTCATGGGAATTTTAAGCAGATTATGTTATCAATTTTTGGAAGAGACTTCAGTGTTTCTCTTGTTTCTCGACGATCTCGACATTTTGCAGGGACACGTTATCTGAAAAGGGGAGTAAATGATCGGGGCAGGGTTGCAAATGATGTTGAAACAGAACAAATTGTTCTCGATGAAGAAGCTGGGTCATGTAAAGGGAAAATGAGTTCGGTTGTACAAATGAGGGGTTCAATTCCCCTTTTCTGGTCACAAGAAGCCTCAAGATTCAGTCCTAAACCTGATATCATCTTGCAAAGATATGATCCCACATACGAGTCAACCAAACTGCACTTTGAAGACCTGGCAAAGAGATATGGCAATCCAATTATTGTGCTAAATCTGATCAAGACCGTCGAAAAAAGGCCCCGAGAAATGATGCTAAGGCGTGAGTTTACTAACGCAGTTGGGTATCTAAACCAGATTCTTGCAGAAGAAAATCAACTTAAATTTATCCATTGGGACTTTCACAAGTTTGCAAAGAGCAAGTCAGCCAATGTACTGGCAGTTTTGGGTGGTGTGGCAAGTGAAGCACTTGATTTAACTGGGTTTTATTATAGTGGAAAGCCTTCCCCTGTGAAAAGGAGAGCCACTCAACTCAGTCGAACAAGCACAGGGAGGGATGCTTCTCTTAGAGATCTGAGGGCTAATTCAGCGGATCTGGCAAGAATGGGAAGTAATAATGATGCTTTAAATTCCTTGACGAAACAAGATCGGGAGTCAGATACTAGTCGAGGGATTAGAAAAAATAATTATGCTAATGCAGCACCACGTTTTCAAAGTGGAGTTCTGCGCACCAATTGTATCGACTGTTTGGATCGTACAAATGTTGCCCAATATGCATATGGCCTAGCAGCTTTAGGTCGCCAACTTAATGCAATGGGTTTGACTGATCAGCCGAAATTGGATGCTGATAGTAGCATTGCTGCAGCTCTAATGGATATGTACCAGAGCATGGGTGATGCTCTTGCCCAGCAATATGGGGGCTCTGCAGCTCACAACACTTATCATGCTAATGGCCAGCGATGGCAAAACGGGCGGGTTTGGACGAGTTGGCTTCTTAACGGGTTGAGCCCAACACAACCTGATAACATAATGGGCCTCAATGGGTTGGGTTGTGAGCGAAGAGGTTGGTGGAGCTCTGGCGGTGGTTGCCTGTGGGCGGTGGAGCTCTGGCTGTGGTCTAGAGGTGGGGCGTCTGTGTTTCCTGAGAGACAGGGAAAGTGGAAAGCTACAACTCAGTCTAGAGAATTTCTGAAGTCTATCAAGCGATACTACAGCAATGCTTATACTGATGGTGAAAAGCAAGATGCGATAAATTTATTTTTGGGATATTTCCAGCCACAGGAAGGAAAACCCGCGCTTTGGGAATTGGATTCGGATTATTACCTCCATGTATCAGGGATCGGAGATGACCTTATCCCTGCGGAATGTTTACCAGTTGACGATAAGCCTGTACGGCCAGGAACCACTCTTGCCCCTGTTCCAGCATGCAGAGAGGATTTCTCACGGATGAAGTTGACATCGTTTCATAAATTGATAGAAAGAACTTGCAGTTCAGTGAAGAATGTTAGGCTTTGCAGCGAAACAGAACATAAATCCGGAAATTCTGGAATGGCACCTGATGCAGCTGAAATACAGCTCAAGAGCCCGAACTGGCTTTTTGGCCAAAGAAAATTCGAGGATGTTCATGCTACTTCCAAGGTGACTTCAAATGAACAAGCAAATGCGGGGTCTGAAGAAGTAAAGAGAATAGATGGCTTATGTGAACTTAACTGGCTTTCTTCCATTGGTGATACTAATGATGAGGATGTCTTCCGAAGATACCTTGTGACATCAATTGATGAAACTAATGGTTGGTATGGTGGAACATTGCTTGGTGATCAAGATGAAAACAGCGAGATATATAAACATTATGCCGAACTCTGTCAGGGCCCTGCAATGGAACCCTTTGAGCATGATCATGAGAAAGAGAGGCATTATGCCGATCTTCTTCGTATGGGGACAATAGATGTTGAGGGTGATTCGGCCGTTGAAGCAGAGATGAAAGCCGCCCTTGAAGAGTACGACCTAATTGGGGCTGATCTCGGTGTTGTTCCCAAGACATGTAAAGGGCTGGCGTTGGACCCGAGCCAATTGACCAGATGGATCATTGGAGAGGAGAGGGTACAAAGGGTTTGA

Network for GWHGAAZE010318

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02383.19	Syja_N	113	409	1.40E-76

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K22913	FIG4	Metabolic pathways	map01100
K22913	FIG4	Inositol phosphate metabolism	map00562

Gene Ontology

GO term	Ontology	Name
GO:0042578	molecular_function	phosphoric ester hydrolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	29.311
	SRR3591706	second leaf	16.164
	SRR3591707	mature leaf	20.917
	SRR3591708	Shoot apex	18.401
	SRR3591709	Stem	41.679
	SRR3591710	White floral bud	32.781
	SRR3591711	White flower	37.338
	SRR3591712	Green floral bud	24.419
	SRR3591713	Yellow flower	41.412
SRP173429	SRR8316895	Juvenile bud stage	12.621
	SRR8316896	Juvenile bud stage	17.941
	SRR8316897	Juvenile bud stage	9.853
	SRR8316894	Third green stage	7.979
	SRR8316900	Third green stage	22.007
	SRR8316901	Third green stage	19.136
	SRR8316898	Complete white stage	10.183
	SRR8316899	Complete white stage	30.677
	SRR8316903	Complete white stage	20.706
	SRR8316902	Silver flowering stage	15.453
	SRR8316904	Silver flowering stage	23.751
	SRR8316905	Silver flowering stage	10.499
	SRR8316906	Gold flowering stage	35.082
	SRR8316907	Gold flowering stage	32.059
	SRR8316908	Gold flowering stage	30.367
SRP132670	SRR6706286	Control	17.439
	SRR6706287	Light intensity 50%	19.832
	SRR6706288	Light intensity 20%	20.513
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	9.755
	CNS0095593	Slightly white alabastrum(diploid) 2	10.375
	CNS0095594	Slightly white alabastrum(diploid) 3	10.205
	CNS0095595	Whole white alabastrum(diploid) 2	11.119
	CNS0095596	Whole white alabastrum(diploid) 3	9.655
	CNS0095597	Whole white alabastrum(diploid) 4	10.122
	CNS0095598	Silvery flower (diploied) 1	12.442
	CNS0095599	Silvery flower (diploied) 2	11.201
	CNS0095600	Silvery flower (diploied) 3	26.961
	CNS0095601	Golden flower (diploid) 1	12.984
	CNS0095602	Golden flower (diploid) 2	29.119
	CNS0095603	Golden flower (diploid) 3	27.732
	CNS0095604	Slightly white alabastrum(tetraploid) 1	12.101
	CNS0095605	Slightly white alabastrum(tetraploid) 2	9.533
	CNS0095606	Slightly white alabastrum(tetraploid) 3	20.532
	CNS0095607	Whole white alabastrum(tetraploid) 1	12.835
	CNS0095608	Whole white alabastrum(tetraploid) 2	12.125
	CNS0095609	Whole white alabastrum(tetraploid) 3	16.677
	CNS0095610	Silvery flower (tetraploid) 1	28.972
	CNS0095611	Silvery flower (tetraploid) 2	30.286
	CNS0095612	Silvery flower (tetraploid) 3	29.157
	CNS0095613	Golden flower (tetraploid) 1	15.758
	CNS0095614	Golden flower (tetraploid) 2	25.107
	CNS0095615	Golden flower (tetraploid) 3	34.296
CRA001975	CRR073297	Stem 1	22.733
	CRR073298	Stem 2	18.200
	CRR073299	Stem 3	15.187
	CRR073300	Leaf 1	23.142
	CRR073301	Leaf 2	20.890
	CRR073302	Leaf 3	17.018
	CRR073303	Juvenile bud 1	17.562
	CRR073304	Juvenile bud 2	14.370
	CRR073305	Juvenile bud 3	21.731
	CRR073306	Third green 1	13.621
	CRR073307	Third green 2	11.294
	CRR073308	Third green 3	15.521
	CRR073309	Second white 1	14.005
	CRR073310	Second white 2	22.368
	CRR073311	Second white 3	22.811
	CRR073312	Silver flowering 1	17.859
	CRR073313	Silver flowering 2	15.497
	CRR073314	Silver flowering 3	16.274
	CRR073315	Gold flowering 1	12.184
	CRR073316	Gold flowering 2	17.544
	CRR073317	Gold flowering 3	9.233
	CRR073318	Tawny withering 1	17.513
	CRR073319	Tawny withering 2	15.948
	CRR073320	Tawny withering 3	18.183