Gene detail

Detail information of GWHGAAZE010291

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010034409.1	2.64911E-53	PREDICTED: receptor-like protein kinase FERONIA [Eucalyptus grandis]
Swissprot	tr\|Q3E8W4\|ANX2_ARATH	9E-50	Receptor-like protein kinase ANXUR2 (Precursor)
trEMBL	tr\|A0A059ADR7\|A0A059ADR7_EUCGR	1E-53	Uncharacterized protein {ECO:0000313\|EMBL:KCW51943.1}
TAIR10	AT5G28680.1	1E-44	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	3040441	3041537	-
GWHAAZE00000003	mRNA	3040441	3041537	-
GWHAAZE00000003	exon	3040441	3040571	-
GWHAAZE00000003	exon	3040663	3040771	-
GWHAAZE00000003	exon	3040898	3041009	-
GWHAAZE00000003	exon	3041089	3041537	-
GWHAAZE00000003	CDS	3041089	3041537	-
GWHAAZE00000003	CDS	3040898	3041009	-
GWHAAZE00000003	CDS	3040663	3040771	-
GWHAAZE00000003	CDS	3040441	3040571	-

Transcript Sequence
>GWHTAAZE010303 ATGACTCGGGATATTGTTGAGCTCTTAAGAGGGGGAAGGTTTGATAGAATTGCCTACACTTCGCCACCATCGAGTAGAGAACATATTATTTCAATCACGGGGGAGAATCTTCTTGTCCAGAATCAAGGAGATAAAATTATAGAAGTTGCATCTACACCACAAATGTGCCGTCACTTTACATTTACTGAGATTCAGTCTGCCACCCACAACTTTAATGGTGCATTTGTCATTGGGAAGGGCGAATTTGGAAAAGTTTACAAAGGATTCATCGACAGTGGAGCAACTGCAATTGCTATAAGGCGGCTAGATCCCATGTCCAACCAAGGAGGCACCGAGTTCCGCACAGAAATCAAGATGCTTTCAAAGTTTCGACATTACAATCTTGTGACTCTCATTGGCTACTACGATGATGGTCATGAGATGACCATTGTTTATGAATATATGGGCCGGGCTGCTCGTGGAATTGAGTATCTTCATACTGGTACGGGTGTTTCGCGAAGGGTCATCCATAGGGATGTGAAAAGCTCAAACATTCTGTTGGATGAAAATTGGGCAGCTAAGAAATCTGATGTCTATTCCTTCGGGGTGGTGTTGTTTGAAGTTCTATCCGAGAAGCCGGCACTAGATTTTAGACTTCCCAAGGAGTCTTGTGGCACGGGCCCAACAAGGTATCAATGTTTACAAAATGATTCAAAGAAACAACCTAAAATGGCTGAGGTTGTGGCAACGCTTGTGTTTGCATTGGCAGCGCAGATGAGCAAGGATTCTTCTCTACTCACTGCTCATCGAGGATGTCTTTAA

Network for GWHGAAZE010291

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	76	149	2.20E-11

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.103
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.157
	SRR3591711	White flower	0.158
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.271
	SRR8316896	Juvenile bud stage	0.613
	SRR8316897	Juvenile bud stage	0.115
	SRR8316894	Third green stage	0.662
	SRR8316900	Third green stage	0.691
	SRR8316901	Third green stage	0.672
	SRR8316898	Complete white stage	0.107
	SRR8316899	Complete white stage	0.213
	SRR8316903	Complete white stage	0.256
	SRR8316902	Silver flowering stage	0.100
	SRR8316904	Silver flowering stage	0.481
	SRR8316905	Silver flowering stage	0.031
	SRR8316906	Gold flowering stage	0.149
	SRR8316907	Gold flowering stage	0.255
	SRR8316908	Gold flowering stage	0.002
SRP132670	SRR6706286	Control	1.075
	SRR6706287	Light intensity 50%	1.032
	SRR6706288	Light intensity 20%	1.247
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.475
	CNS0095593	Slightly white alabastrum(diploid) 2	0.180
	CNS0095594	Slightly white alabastrum(diploid) 3	0.173
	CNS0095595	Whole white alabastrum(diploid) 2	0.099
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.101
	CNS0095598	Silvery flower (diploied) 1	0.950
	CNS0095599	Silvery flower (diploied) 2	0.372
	CNS0095600	Silvery flower (diploied) 3	0.552
	CNS0095601	Golden flower (diploid) 1	0.196
	CNS0095602	Golden flower (diploid) 2	0.650
	CNS0095603	Golden flower (diploid) 3	0.974
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.080
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.028
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.168
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.222
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.093
	CNS0095610	Silvery flower (tetraploid) 1	0.094
	CNS0095611	Silvery flower (tetraploid) 2	0.107
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.008
	CNS0095614	Golden flower (tetraploid) 2	0.097
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	2.789
	CRR073298	Stem 2	1.366
	CRR073299	Stem 3	0.141
	CRR073300	Leaf 1	1.814
	CRR073301	Leaf 2	1.134
	CRR073302	Leaf 3	0.302
	CRR073303	Juvenile bud 1	0.267
	CRR073304	Juvenile bud 2	0.046
	CRR073305	Juvenile bud 3	0.225
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.131
	CRR073320	Tawny withering 3	0.000