Detail information of GWHGAAZE010278


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP43802.16.2674E-100hypothetical protein JCGZ_23010 [Jatropha curcas]
Swissprottr|Q96288|BBX24_ARATH6E-78B-box zinc finger protein 24 {ECO:0000303|PubMed:19920209}
trEMBLtr|A0A067L5X7|A0A067L5X7_JATCU2E-100Uncharacterized protein {ECO:0000313|EMBL:KDP43802.1}
TAIR10AT1G06040.16E-63B-box zinc finger family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000003gene24450492448025-
GWHAAZE00000003mRNA24450492448025-
GWHAAZE00000003exon24450492445336-
GWHAAZE00000003exon24460022446358-
GWHAAZE00000003exon24478432448025-
GWHAAZE00000003CDS24478432448025-
GWHAAZE00000003CDS24460022446358-
GWHAAZE00000003CDS24450492445336-
Transcript Sequence

Network for GWHGAAZE010278

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00643.25zf-B_box53951.80E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf57.273
SRR3591706second leaf537.146
SRR3591707mature leaf526.332
SRR3591708Shoot apex220.691
SRR3591709Stem67.621
SRR3591710White floral bud52.133
SRR3591711White flower138.481
SRR3591712Green floral bud58.811
SRR3591713Yellow flower142.280
SRP173429 SRR8316895Juvenile bud stage 96.901
SRR8316896Juvenile bud stage 128.359
SRR8316897Juvenile bud stage 99.195
SRR8316894Third green stage 51.548
SRR8316900Third green stage 89.603
SRR8316901Third green stage 103.670
SRR8316898Complete white stage 30.064
SRR8316899Complete white stage 89.728
SRR8316903Complete white stage 48.784
SRR8316902Silver flowering stage52.640
SRR8316904Silver flowering stage59.067
SRR8316905Silver flowering stage28.491
SRR8316906Gold flowering stage 134.122
SRR8316907Gold flowering stage 133.420
SRR8316908Gold flowering stage 172.879
SRP132670SRR6706286Control207.985
SRR6706287Light intensity 50%210.088
SRR6706288Light intensity 20%226.950
CNP0000432CNS0095592Slightly white alabastrum(diploid) 198.373
CNS0095593Slightly white alabastrum(diploid) 281.654
CNS0095594Slightly white alabastrum(diploid) 390.859
CNS0095595Whole white alabastrum(diploid) 269.458
CNS0095596Whole white alabastrum(diploid) 373.486
CNS0095597Whole white alabastrum(diploid) 453.140
CNS0095598Silvery flower (diploied) 1279.055
CNS0095599Silvery flower (diploied) 2246.104
CNS0095600Silvery flower (diploied) 3185.524
CNS0095601Golden flower (diploid) 1336.824
CNS0095602Golden flower (diploid) 2265.323
CNS0095603Golden flower (diploid) 3250.914
CNS0095604Slightly white alabastrum(tetraploid) 1137.599
CNS0095605Slightly white alabastrum(tetraploid) 2143.303
CNS0095606Slightly white alabastrum(tetraploid) 3203.810
CNS0095607Whole white alabastrum(tetraploid) 166.941
CNS0095608Whole white alabastrum(tetraploid) 242.199
CNS0095609Whole white alabastrum(tetraploid) 3128.778
CNS0095610Silvery flower (tetraploid) 1354.049
CNS0095611Silvery flower (tetraploid) 2399.680
CNS0095612Silvery flower (tetraploid) 326.223
CNS0095613Golden flower (tetraploid) 1299.207
CNS0095614Golden flower (tetraploid) 2380.446
CNS0095615Golden flower (tetraploid) 3435.258
CRA001975CRR073297Stem 119.370
CRR073298Stem 216.182
CRR073299Stem 311.740
CRR073300Leaf 119.293
CRR073301Leaf 225.813
CRR073302Leaf 38.431
CRR073303Juvenile bud 19.074
CRR073304Juvenile bud 26.308
CRR073305Juvenile bud 35.531
CRR073306Third green 160.049
CRR073307Third green 227.568
CRR073308Third green 341.204
CRR073309Second white 123.504
CRR073310Second white 244.100
CRR073311Second white 331.734
CRR073312Silver flowering 123.596
CRR073313Silver flowering 217.995
CRR073314Silver flowering 317.711
CRR073315Gold flowering 151.332
CRR073316Gold flowering 259.988
CRR073317Gold flowering 337.640
CRR073318Tawny withering 11.165
CRR073319Tawny withering 22.372
CRR073320Tawny withering 32.883