Gene detail

Detail information of GWHGAAZE010217

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_008222595.1	1.0462E-157	PREDICTED: probable transcription factor PosF21 [Prunus mume]
Swissprot	tr\|Q04088\|POF21_ARATH	2E-123	Probable transcription factor PosF21
trEMBL	tr\|M5XCD0\|M5XCD0_PRUPE	4E-158	Uncharacterized protein {ECO:0000313\|EMBL:EMJ23579.1}
TAIR10	AT1G06070.1	3E-99	Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000003	gene	64617	73209	+
GWHAAZE00000003	mRNA	64617	73209	+
GWHAAZE00000003	exon	64617	65296	+
GWHAAZE00000003	exon	69763	69895	+
GWHAAZE00000003	exon	70050	70134	+
GWHAAZE00000003	exon	73175	73209	+
GWHAAZE00000003	CDS	64617	65296	+
GWHAAZE00000003	CDS	69763	69895	+
GWHAAZE00000003	CDS	70050	70134	+
GWHAAZE00000003	CDS	73175	73209	+

Transcript Sequence
>GWHTAAZE010229 ATGGACAAGGATAAATCTCCTAACCATAGTGGAGGGTTACTCCCTCCTTCGGGTAGGCATTCGGTTTTTTCATCTCAAGGGAATAGCTTAAATGTGAAACCAGAACCATCAGGGGCAACTGCATTGCCTCCATTAGTACCTGGTAGTAGTGCTTCAGAATCAGGTCGGTTTGGTCAGGGGGATTCGAGCCGGTTCAGTCATGATATTAGTCGAATGCCCGATAACCCGCCAAAGAATACGGGTCACCGACGTGCCCATTCAGAGATTCTTACCTTACCAGATGACATTAGCTTCGATAGTGATCTTGGTGTTGTGGGTGCTATGGATGGGCCTTCTTTCTCCGATGATACCGAAGAGGATTTGTTTTCAATGTACCTTGATATGGATAAATTCAATTCTTCGTCGGCAACGTCTTCTTTTCAAATGGGAGAACCTAATTCTACAGCGGCTCAGTCGACGGTTGCAGTTAACCCGAGTGTTGAGAATATGGGCCCTACTACTTCCAATGAGAGGCCTAGGATTAGGCATCATCATAGCCAGTCAATGGACGGGTCATCTACGATTCAAGCAGATATGCTCACGTCCGGTTCGGAAGAAACATCTTCGGCCGATGCGAAGAAGTCCCTTTCTGCTGCTAAGCTTGCTGAACTTGCTCTTGTTGATCCCAAGCGTGCTAAGAGGATATGGGCAAATAGGCAGTCAGCTGCAAGGTCGAAGGAAAGGAAGATGAGGTACATAGCGGAGCTCGAAAGGAAAGTACAAACTCTTCAAACTGAAGCAACCTCTTTGTCCGCTCAATTGACCCTTTTGCAGAGGGATACAAGTGGTCTGAATTCTGAAAACAGTGAACTGAAACTGCGTTTGCAAACAATGGAACAACAGGTTCACTTGCAAGATGTGAATGCCGCTGTTCTTTGGACTATTCGATTTTAA

Network for GWHGAAZE010217

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00170.22	bZIP_1	223	281	2.60E-09

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	13.632
	SRR3591706	second leaf	6.325
	SRR3591707	mature leaf	5.132
	SRR3591708	Shoot apex	12.971
	SRR3591709	Stem	8.463
	SRR3591710	White floral bud	8.952
	SRR3591711	White flower	10.005
	SRR3591712	Green floral bud	11.567
	SRR3591713	Yellow flower	5.411
SRP173429	SRR8316895	Juvenile bud stage	10.243
	SRR8316896	Juvenile bud stage	11.446
	SRR8316897	Juvenile bud stage	8.611
	SRR8316894	Third green stage	3.979
	SRR8316900	Third green stage	11.138
	SRR8316901	Third green stage	9.154
	SRR8316898	Complete white stage	2.501
	SRR8316899	Complete white stage	18.362
	SRR8316903	Complete white stage	5.657
	SRR8316902	Silver flowering stage	3.367
	SRR8316904	Silver flowering stage	3.748
	SRR8316905	Silver flowering stage	1.811
	SRR8316906	Gold flowering stage	3.860
	SRR8316907	Gold flowering stage	4.455
	SRR8316908	Gold flowering stage	6.928
SRP132670	SRR6706286	Control	8.018
	SRR6706287	Light intensity 50%	8.280
	SRR6706288	Light intensity 20%	7.554
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.680
	CNS0095593	Slightly white alabastrum(diploid) 2	6.829
	CNS0095594	Slightly white alabastrum(diploid) 3	8.576
	CNS0095595	Whole white alabastrum(diploid) 2	4.707
	CNS0095596	Whole white alabastrum(diploid) 3	4.787
	CNS0095597	Whole white alabastrum(diploid) 4	5.051
	CNS0095598	Silvery flower (diploied) 1	8.362
	CNS0095599	Silvery flower (diploied) 2	6.325
	CNS0095600	Silvery flower (diploied) 3	8.314
	CNS0095601	Golden flower (diploid) 1	8.466
	CNS0095602	Golden flower (diploid) 2	12.436
	CNS0095603	Golden flower (diploid) 3	9.922
	CNS0095604	Slightly white alabastrum(tetraploid) 1	8.614
	CNS0095605	Slightly white alabastrum(tetraploid) 2	6.496
	CNS0095606	Slightly white alabastrum(tetraploid) 3	18.250
	CNS0095607	Whole white alabastrum(tetraploid) 1	5.989
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.627
	CNS0095609	Whole white alabastrum(tetraploid) 3	8.175
	CNS0095610	Silvery flower (tetraploid) 1	7.571
	CNS0095611	Silvery flower (tetraploid) 2	8.954
	CNS0095612	Silvery flower (tetraploid) 3	9.301
	CNS0095613	Golden flower (tetraploid) 1	4.112
	CNS0095614	Golden flower (tetraploid) 2	6.448
	CNS0095615	Golden flower (tetraploid) 3	7.182
CRA001975	CRR073297	Stem 1	17.409
	CRR073298	Stem 2	17.321
	CRR073299	Stem 3	20.647
	CRR073300	Leaf 1	18.187
	CRR073301	Leaf 2	18.208
	CRR073302	Leaf 3	13.121
	CRR073303	Juvenile bud 1	14.659
	CRR073304	Juvenile bud 2	8.431
	CRR073305	Juvenile bud 3	15.225
	CRR073306	Third green 1	5.105
	CRR073307	Third green 2	4.368
	CRR073308	Third green 3	5.575
	CRR073309	Second white 1	4.964
	CRR073310	Second white 2	5.398
	CRR073311	Second white 3	6.326
	CRR073312	Silver flowering 1	6.076
	CRR073313	Silver flowering 2	4.772
	CRR073314	Silver flowering 3	5.073
	CRR073315	Gold flowering 1	17.076
	CRR073316	Gold flowering 2	22.227
	CRR073317	Gold flowering 3	15.150
	CRR073318	Tawny withering 1	14.206
	CRR073319	Tawny withering 2	14.914
	CRR073320	Tawny withering 3	19.609