Detail information of GWHGAAZE009837


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG03726.11.139E-159Gibberellin receptor GID1B -like protein [Gossypium arboreum]
Swissprottr|Q9LYC1|GID1B_ARATH6E-153Gibberellin receptor GID1B
trEMBLtr|F6HQ36|F6HQ36_VITVI2E-159Putative uncharacterized protein {ECO:0000313|EMBL:CCB56792.1}
TAIR10AT3G63010.13E-122alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene118252880118253602-
GWHAAZE00000002mRNA118252880118253602-
GWHAAZE00000002exon118252880118253602-
GWHAAZE00000002CDS118252880118253602-
Transcript Sequence

Network for GWHGAAZE009837

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07859.14Abhydrolase_342176.70E-62
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14493GID1 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.238
SRR3591706second leaf0.806
SRR3591707mature leaf20.005
SRR3591708Shoot apex2.187
SRR3591709Stem57.186
SRR3591710White floral bud30.382
SRR3591711White flower190.379
SRR3591712Green floral bud9.491
SRR3591713Yellow flower143.346
SRP173429 SRR8316895Juvenile bud stage 5.402
SRR8316896Juvenile bud stage 8.183
SRR8316897Juvenile bud stage 2.584
SRR8316894Third green stage 3.907
SRR8316900Third green stage 5.415
SRR8316901Third green stage 2.996
SRR8316898Complete white stage 5.427
SRR8316899Complete white stage 8.493
SRR8316903Complete white stage 15.338
SRR8316902Silver flowering stage33.101
SRR8316904Silver flowering stage55.910
SRR8316905Silver flowering stage21.187
SRR8316906Gold flowering stage 84.959
SRR8316907Gold flowering stage 92.452
SRR8316908Gold flowering stage 157.957
SRP132670SRR6706286Control8.202
SRR6706287Light intensity 50%7.260
SRR6706288Light intensity 20%4.550
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.547
CNS0095593Slightly white alabastrum(diploid) 25.819
CNS0095594Slightly white alabastrum(diploid) 310.205
CNS0095595Whole white alabastrum(diploid) 24.799
CNS0095596Whole white alabastrum(diploid) 32.352
CNS0095597Whole white alabastrum(diploid) 45.838
CNS0095598Silvery flower (diploied) 189.841
CNS0095599Silvery flower (diploied) 263.298
CNS0095600Silvery flower (diploied) 370.132
CNS0095601Golden flower (diploid) 1103.453
CNS0095602Golden flower (diploid) 2131.658
CNS0095603Golden flower (diploid) 3128.932
CNS0095604Slightly white alabastrum(tetraploid) 113.443
CNS0095605Slightly white alabastrum(tetraploid) 28.901
CNS0095606Slightly white alabastrum(tetraploid) 324.473
CNS0095607Whole white alabastrum(tetraploid) 113.545
CNS0095608Whole white alabastrum(tetraploid) 23.787
CNS0095609Whole white alabastrum(tetraploid) 35.966
CNS0095610Silvery flower (tetraploid) 1155.773
CNS0095611Silvery flower (tetraploid) 2132.913
CNS0095612Silvery flower (tetraploid) 384.290
CNS0095613Golden flower (tetraploid) 1110.616
CNS0095614Golden flower (tetraploid) 2307.388
CNS0095615Golden flower (tetraploid) 376.719
CRA001975CRR073297Stem 16.408
CRR073298Stem 23.389
CRR073299Stem 34.999
CRR073300Leaf 11.403
CRR073301Leaf 22.282
CRR073302Leaf 31.921
CRR073303Juvenile bud 12.013
CRR073304Juvenile bud 21.824
CRR073305Juvenile bud 32.732
CRR073306Third green 139.603
CRR073307Third green 217.899
CRR073308Third green 337.007
CRR073309Second white 1109.489
CRR073310Second white 289.521
CRR073311Second white 395.212
CRR073312Silver flowering 199.477
CRR073313Silver flowering 2107.245
CRR073314Silver flowering 393.379
CRR073315Gold flowering 18.286
CRR073316Gold flowering 210.687
CRR073317Gold flowering 36.661
CRR073318Tawny withering 135.665
CRR073319Tawny withering 230.399
CRR073320Tawny withering 39.675