Detail information of GWHGAAZE009821


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010652109.10PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Vitis vinifera]
Swissprottr|Q9M8J9|BPM2_ARATH0BTB/POZ and MATH domain-containing protein 2
trEMBLtr|D7TPA6|D7TPA6_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI32329.3}
TAIR10AT3G06190.17E-172BTB-POZ and MATH domain 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene117914457117919898-
GWHAAZE00000002mRNA117914457117919898-
GWHAAZE00000002exon117919483117919898-
GWHAAZE00000002exon117917688117918036-
GWHAAZE00000002exon117914783117915059-
GWHAAZE00000002exon117914457117914638-
GWHAAZE00000002CDS117919483117919898-
GWHAAZE00000002CDS117917688117918036-
GWHAAZE00000002CDS117914783117915059-
GWHAAZE00000002CDS117914457117914638-
Transcript Sequence

Network for GWHGAAZE009821

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00651.32BTB1943101.10E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF
Ubiquitin Family3-box

KEGG pathway

KO Enzyme pathway mapID
K10523SPOP Hedgehog signaling pathway map04340
Hedgehog signaling pathway - flymap04341

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf27.468
SRR3591706second leaf17.389
SRR3591707mature leaf22.557
SRR3591708Shoot apex31.880
SRR3591709Stem39.512
SRR3591710White floral bud29.058
SRR3591711White flower49.149
SRR3591712Green floral bud27.592
SRR3591713Yellow flower65.084
SRP173429 SRR8316895Juvenile bud stage 26.893
SRR8316896Juvenile bud stage 24.855
SRR8316897Juvenile bud stage 13.565
SRR8316894Third green stage 12.067
SRR8316900Third green stage 33.201
SRR8316901Third green stage 35.657
SRR8316898Complete white stage 10.799
SRR8316899Complete white stage 37.724
SRR8316903Complete white stage 19.970
SRR8316902Silver flowering stage20.504
SRR8316904Silver flowering stage28.532
SRR8316905Silver flowering stage12.590
SRR8316906Gold flowering stage 57.139
SRR8316907Gold flowering stage 51.408
SRR8316908Gold flowering stage 79.254
SRP132670SRR6706286Control24.520
SRR6706287Light intensity 50%25.597
SRR6706288Light intensity 20%28.575
CNP0000432CNS0095592Slightly white alabastrum(diploid) 123.717
CNS0095593Slightly white alabastrum(diploid) 227.450
CNS0095594Slightly white alabastrum(diploid) 326.065
CNS0095595Whole white alabastrum(diploid) 225.119
CNS0095596Whole white alabastrum(diploid) 319.629
CNS0095597Whole white alabastrum(diploid) 422.310
CNS0095598Silvery flower (diploied) 128.564
CNS0095599Silvery flower (diploied) 228.826
CNS0095600Silvery flower (diploied) 343.219
CNS0095601Golden flower (diploid) 130.009
CNS0095602Golden flower (diploid) 249.839
CNS0095603Golden flower (diploid) 348.878
CNS0095604Slightly white alabastrum(tetraploid) 132.916
CNS0095605Slightly white alabastrum(tetraploid) 224.925
CNS0095606Slightly white alabastrum(tetraploid) 348.916
CNS0095607Whole white alabastrum(tetraploid) 124.036
CNS0095608Whole white alabastrum(tetraploid) 220.617
CNS0095609Whole white alabastrum(tetraploid) 335.638
CNS0095610Silvery flower (tetraploid) 163.496
CNS0095611Silvery flower (tetraploid) 255.700
CNS0095612Silvery flower (tetraploid) 371.711
CNS0095613Golden flower (tetraploid) 157.694
CNS0095614Golden flower (tetraploid) 257.873
CNS0095615Golden flower (tetraploid) 369.734
CRA001975CRR073297Stem 124.674
CRR073298Stem 224.956
CRR073299Stem 326.156
CRR073300Leaf 124.852
CRR073301Leaf 225.940
CRR073302Leaf 324.097
CRR073303Juvenile bud 122.079
CRR073304Juvenile bud 221.152
CRR073305Juvenile bud 323.919
CRR073306Third green 127.621
CRR073307Third green 221.051
CRR073308Third green 323.219
CRR073309Second white 130.648
CRR073310Second white 234.502
CRR073311Second white 333.898
CRR073312Silver flowering 156.082
CRR073313Silver flowering 262.834
CRR073314Silver flowering 351.724
CRR073315Gold flowering 120.717
CRR073316Gold flowering 221.111
CRR073317Gold flowering 316.678
CRR073318Tawny withering 125.010
CRR073319Tawny withering 232.066
CRR073320Tawny withering 323.624