Detail information of GWHGAAZE009728


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010278166.17.12461E-90PREDICTED: auxin-responsive protein IAA4-like [Nelumbo nucifera]
Swissprottr|O24542|AX22D_VIGRR1E-83Auxin-induced protein 22D
trEMBLtr|D7SQK0|D7SQK0_VITVI2E-88Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIR10AT5G43700.15E-62AUX/IAA transcriptional regulator family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene115999232116000207+
GWHAAZE00000002mRNA115999232116000207+
GWHAAZE00000002exon115999232115999646+
GWHAAZE00000002exon115999832116000207+
GWHAAZE00000002five_prime_UTR115999232115999449+
GWHAAZE00000002CDS115999450115999646+
GWHAAZE00000002CDS115999832116000207+
Transcript Sequence

Network for GWHGAAZE009728

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.17AUX_IAA501882.80E-55
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf61.925
SRR3591706second leaf53.925
SRR3591707mature leaf12.998
SRR3591708Shoot apex53.538
SRR3591709Stem20.995
SRR3591710White floral bud67.774
SRR3591711White flower88.500
SRR3591712Green floral bud73.080
SRR3591713Yellow flower20.337
SRP173429 SRR8316895Juvenile bud stage 42.480
SRR8316896Juvenile bud stage 58.447
SRR8316897Juvenile bud stage 32.504
SRR8316894Third green stage 26.310
SRR8316900Third green stage 55.937
SRR8316901Third green stage 89.005
SRR8316898Complete white stage 19.286
SRR8316899Complete white stage 142.322
SRR8316903Complete white stage 24.087
SRR8316902Silver flowering stage24.134
SRR8316904Silver flowering stage25.858
SRR8316905Silver flowering stage20.237
SRR8316906Gold flowering stage 55.804
SRR8316907Gold flowering stage 14.817
SRR8316908Gold flowering stage 33.212
SRP132670SRR6706286Control168.713
SRR6706287Light intensity 50%203.849
SRR6706288Light intensity 20%220.755
CNP0000432CNS0095592Slightly white alabastrum(diploid) 144.688
CNS0095593Slightly white alabastrum(diploid) 266.380
CNS0095594Slightly white alabastrum(diploid) 354.923
CNS0095595Whole white alabastrum(diploid) 258.214
CNS0095596Whole white alabastrum(diploid) 339.424
CNS0095597Whole white alabastrum(diploid) 468.339
CNS0095598Silvery flower (diploied) 129.730
CNS0095599Silvery flower (diploied) 223.215
CNS0095600Silvery flower (diploied) 313.418
CNS0095601Golden flower (diploid) 17.271
CNS0095602Golden flower (diploid) 26.598
CNS0095603Golden flower (diploid) 35.570
CNS0095604Slightly white alabastrum(tetraploid) 133.099
CNS0095605Slightly white alabastrum(tetraploid) 220.647
CNS0095606Slightly white alabastrum(tetraploid) 381.677
CNS0095607Whole white alabastrum(tetraploid) 120.706
CNS0095608Whole white alabastrum(tetraploid) 221.136
CNS0095609Whole white alabastrum(tetraploid) 348.243
CNS0095610Silvery flower (tetraploid) 15.536
CNS0095611Silvery flower (tetraploid) 24.583
CNS0095612Silvery flower (tetraploid) 38.904
CNS0095613Golden flower (tetraploid) 10.852
CNS0095614Golden flower (tetraploid) 20.686
CNS0095615Golden flower (tetraploid) 32.750
CRA001975CRR073297Stem 192.652
CRR073298Stem 2107.739
CRR073299Stem 365.846
CRR073300Leaf 1186.092
CRR073301Leaf 2188.165
CRR073302Leaf 3122.127
CRR073303Juvenile bud 1139.374
CRR073304Juvenile bud 2109.662
CRR073305Juvenile bud 3122.801
CRR073306Third green 178.558
CRR073307Third green 2144.362
CRR073308Third green 381.161
CRR073309Second white 17.029
CRR073310Second white 25.812
CRR073311Second white 34.774
CRR073312Silver flowering 13.370
CRR073313Silver flowering 21.361
CRR073314Silver flowering 31.418
CRR073315Gold flowering 122.083
CRR073316Gold flowering 215.014
CRR073317Gold flowering 313.292
CRR073318Tawny withering 12.512
CRR073319Tawny withering 21.088
CRR073320Tawny withering 31.124