Detail information of GWHGAAZE009692


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008235694.15.5267E-138PREDICTED: dehydrodolichyl diphosphate synthase 6-like [Prunus mume]
Swissprottr|Q8S2T1|DDPS6_ARATH9E-114Dehydrodolichyl diphosphate synthase 6
trEMBLtr|M5VKR1|M5VKR1_PRUPE5E-138Uncharacterized protein {ECO:0000313|EMBL:EMJ01734.1}
TAIR10AT2G17570.19E-92Undecaprenyl pyrophosphate synthetase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene115288084115288947-
GWHAAZE00000002mRNA115288084115288947-
GWHAAZE00000002exon115288410115288947-
GWHAAZE00000002exon115288084115288352-
GWHAAZE00000002CDS115288410115288947-
GWHAAZE00000002CDS115288084115288352-
Transcript Sequence

Network for GWHGAAZE009692

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01255.20Prenyltransf402581.30E-74
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K11778DHDDS, RER2, SRT1 Biosynthesis of secondary metabolites map01110
Terpenoid backbone biosynthesismap00900

Gene Ontology

GO term OntologyName
GO:0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.776
SRR3591706second leaf11.643
SRR3591707mature leaf12.196
SRR3591708Shoot apex21.452
SRR3591709Stem32.499
SRR3591710White floral bud24.508
SRR3591711White flower30.418
SRR3591712Green floral bud32.026
SRR3591713Yellow flower24.394
SRP173429 SRR8316895Juvenile bud stage 12.144
SRR8316896Juvenile bud stage 14.788
SRR8316897Juvenile bud stage 6.584
SRR8316894Third green stage 7.955
SRR8316900Third green stage 25.550
SRR8316901Third green stage 26.790
SRR8316898Complete white stage 20.566
SRR8316899Complete white stage 32.882
SRR8316903Complete white stage 30.451
SRR8316902Silver flowering stage18.443
SRR8316904Silver flowering stage23.313
SRR8316905Silver flowering stage13.062
SRR8316906Gold flowering stage 25.907
SRR8316907Gold flowering stage 27.652
SRR8316908Gold flowering stage 24.543
SRP132670SRR6706286Control19.595
SRR6706287Light intensity 50%20.753
SRR6706288Light intensity 20%23.384
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.446
CNS0095593Slightly white alabastrum(diploid) 214.742
CNS0095594Slightly white alabastrum(diploid) 315.995
CNS0095595Whole white alabastrum(diploid) 221.890
CNS0095596Whole white alabastrum(diploid) 316.420
CNS0095597Whole white alabastrum(diploid) 415.681
CNS0095598Silvery flower (diploied) 117.232
CNS0095599Silvery flower (diploied) 215.073
CNS0095600Silvery flower (diploied) 353.945
CNS0095601Golden flower (diploid) 116.873
CNS0095602Golden flower (diploid) 239.925
CNS0095603Golden flower (diploid) 338.000
CNS0095604Slightly white alabastrum(tetraploid) 112.204
CNS0095605Slightly white alabastrum(tetraploid) 213.684
CNS0095606Slightly white alabastrum(tetraploid) 322.447
CNS0095607Whole white alabastrum(tetraploid) 19.326
CNS0095608Whole white alabastrum(tetraploid) 29.359
CNS0095609Whole white alabastrum(tetraploid) 319.066
CNS0095610Silvery flower (tetraploid) 133.740
CNS0095611Silvery flower (tetraploid) 228.448
CNS0095612Silvery flower (tetraploid) 329.575
CNS0095613Golden flower (tetraploid) 117.168
CNS0095614Golden flower (tetraploid) 228.147
CNS0095615Golden flower (tetraploid) 322.646
CRA001975CRR073297Stem 121.848
CRR073298Stem 221.506
CRR073299Stem 318.904
CRR073300Leaf 129.939
CRR073301Leaf 219.641
CRR073302Leaf 329.004
CRR073303Juvenile bud 130.806
CRR073304Juvenile bud 237.680
CRR073305Juvenile bud 330.695
CRR073306Third green 193.456
CRR073307Third green 274.696
CRR073308Third green 366.465
CRR073309Second white 143.870
CRR073310Second white 229.660
CRR073311Second white 325.646
CRR073312Silver flowering 125.395
CRR073313Silver flowering 228.602
CRR073314Silver flowering 324.991
CRR073315Gold flowering 15.711
CRR073316Gold flowering 27.672
CRR073317Gold flowering 38.813
CRR073318Tawny withering 113.728
CRR073319Tawny withering 219.528
CRR073320Tawny withering 311.173