Detail information of GWHGAAZE009626


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP03814.12.0242E-158unnamed protein product [Coffea canephora]
Swissprottr|Q8RWW0|ALE2_ARATH1E-126Receptor-like serine/threonine-protein kinase ALE2 (Precursor)
trEMBLtr|A0A068U6L0|A0A068U6L0_COFCA8E-159Coffea canephora DH200=94 genomic scaffold, scaffold_11 {ECO:0000313|EMBL:CDP03814.1}
TAIR10AT2G20300.13E-103Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene114001282114032587-
GWHAAZE00000002mRNA114001282114032587-
GWHAAZE00000002exon114032479114032587-
GWHAAZE00000002exon114029542114029655-
GWHAAZE00000002exon114029364114029465-
GWHAAZE00000002exon114028169114028537-
GWHAAZE00000002exon114028006114028083-
GWHAAZE00000002exon114027821114027907-
GWHAAZE00000002exon114026959114027345-
GWHAAZE00000002exon114025292114025713-
GWHAAZE00000002exon114021902114021991-
GWHAAZE00000002exon114021593114021670-
GWHAAZE00000002exon114020926114021000-
GWHAAZE00000002exon114019909114019961-
GWHAAZE00000002exon114019077114019227-
GWHAAZE00000002exon114017283114017409-
GWHAAZE00000002exon114017049114017122-
GWHAAZE00000002exon114016616114016754-
GWHAAZE00000002exon114009403114009449-
GWHAAZE00000002exon114001282114001422-
GWHAAZE00000002CDS114032479114032587-
GWHAAZE00000002CDS114029542114029655-
GWHAAZE00000002CDS114029364114029465-
GWHAAZE00000002CDS114028169114028537-
GWHAAZE00000002CDS114028006114028083-
GWHAAZE00000002CDS114027821114027907-
GWHAAZE00000002CDS114026959114027345-
GWHAAZE00000002CDS114025292114025713-
GWHAAZE00000002CDS114021902114021991-
GWHAAZE00000002CDS114021593114021670-
GWHAAZE00000002CDS114020926114021000-
GWHAAZE00000002CDS114019909114019961-
GWHAAZE00000002CDS114019077114019227-
GWHAAZE00000002CDS114017283114017409-
GWHAAZE00000002CDS114017049114017122-
GWHAAZE00000002CDS114016616114016754-
GWHAAZE00000002CDS114009403114009449-
GWHAAZE00000002CDS114001282114001422-
Transcript Sequence

Network for GWHGAAZE009626

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr3324217.00E-17
PF00294.25PfkB5608245.30E-27
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_Extensin

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding
GO:0016773molecular_functionphosphotransferase activity, alcohol group as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf25.787
SRR3591706second leaf14.607
SRR3591707mature leaf8.081
SRR3591708Shoot apex21.137
SRR3591709Stem13.238
SRR3591710White floral bud8.819
SRR3591711White flower7.872
SRR3591712Green floral bud16.016
SRR3591713Yellow flower7.045
SRP173429 SRR8316895Juvenile bud stage 13.800
SRR8316896Juvenile bud stage 16.605
SRR8316897Juvenile bud stage 8.980
SRR8316894Third green stage 8.162
SRR8316900Third green stage 17.401
SRR8316901Third green stage 15.915
SRR8316898Complete white stage 3.868
SRR8316899Complete white stage 18.553
SRR8316903Complete white stage 6.104
SRR8316902Silver flowering stage2.767
SRR8316904Silver flowering stage2.599
SRR8316905Silver flowering stage1.347
SRR8316906Gold flowering stage 3.283
SRR8316907Gold flowering stage 3.725
SRR8316908Gold flowering stage 4.499
SRP132670SRR6706286Control16.510
SRR6706287Light intensity 50%17.793
SRR6706288Light intensity 20%19.901
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.344
CNS0095593Slightly white alabastrum(diploid) 211.019
CNS0095594Slightly white alabastrum(diploid) 310.417
CNS0095595Whole white alabastrum(diploid) 29.094
CNS0095596Whole white alabastrum(diploid) 37.996
CNS0095597Whole white alabastrum(diploid) 48.083
CNS0095598Silvery flower (diploied) 111.812
CNS0095599Silvery flower (diploied) 29.080
CNS0095600Silvery flower (diploied) 36.461
CNS0095601Golden flower (diploid) 19.591
CNS0095602Golden flower (diploid) 27.162
CNS0095603Golden flower (diploid) 37.424
CNS0095604Slightly white alabastrum(tetraploid) 111.691
CNS0095605Slightly white alabastrum(tetraploid) 29.577
CNS0095606Slightly white alabastrum(tetraploid) 318.290
CNS0095607Whole white alabastrum(tetraploid) 17.983
CNS0095608Whole white alabastrum(tetraploid) 26.450
CNS0095609Whole white alabastrum(tetraploid) 313.852
CNS0095610Silvery flower (tetraploid) 18.157
CNS0095611Silvery flower (tetraploid) 28.598
CNS0095612Silvery flower (tetraploid) 37.052
CNS0095613Golden flower (tetraploid) 13.284
CNS0095614Golden flower (tetraploid) 26.647
CNS0095615Golden flower (tetraploid) 33.480
CRA001975CRR073297Stem 124.867
CRR073298Stem 223.619
CRR073299Stem 320.541
CRR073300Leaf 124.354
CRR073301Leaf 222.202
CRR073302Leaf 319.936
CRR073303Juvenile bud 117.384
CRR073304Juvenile bud 213.397
CRR073305Juvenile bud 319.201
CRR073306Third green 12.726
CRR073307Third green 21.635
CRR073308Third green 31.988
CRR073309Second white 11.570
CRR073310Second white 21.246
CRR073311Second white 30.921
CRR073312Silver flowering 10.678
CRR073313Silver flowering 21.281
CRR073314Silver flowering 30.837
CRR073315Gold flowering 111.940
CRR073316Gold flowering 218.250
CRR073317Gold flowering 39.478
CRR073318Tawny withering 118.947
CRR073319Tawny withering 213.906
CRR073320Tawny withering 317.875