Detail information of GWHGAAZE009560


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP15728.10unnamed protein product [Coffea canephora]
Swissprottr|Q9SZ46|C82C4_ARATH1E-175Cytochrome P450 82C4
trEMBLtr|A0A068V782|A0A068V782_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_105 {ECO:0000313|EMBL:CDP15728.1}
TAIR10AT4G31940.14E-130cytochrome P450, family 82, subfamily C, polypeptide 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene112416397112418787+
GWHAAZE00000002mRNA112416397112418787+
GWHAAZE00000002exon112416397112417326+
GWHAAZE00000002exon112418164112418787+
GWHAAZE00000002CDS112416397112417326+
GWHAAZE00000002CDS112418164112418787+
Transcript Sequence

Network for GWHGAAZE009560

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00067.23p450315004.00E-86
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17961CYP82G1 Diterpenoid biosynthesis map00904

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0005506molecular_functioniron ion binding
GO:0016705molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.191
SRR3591706second leaf21.221
SRR3591707mature leaf144.941
SRR3591708Shoot apex9.037
SRR3591709Stem1.131
SRR3591710White floral bud113.630
SRR3591711White flower101.856
SRR3591712Green floral bud17.804
SRR3591713Yellow flower48.719
SRP173429 SRR8316895Juvenile bud stage 16.029
SRR8316896Juvenile bud stage 11.506
SRR8316897Juvenile bud stage 9.335
SRR8316894Third green stage 5.354
SRR8316900Third green stage 12.041
SRR8316901Third green stage 44.825
SRR8316898Complete white stage 651.432
SRR8316899Complete white stage 153.653
SRR8316903Complete white stage 710.761
SRR8316902Silver flowering stage58.215
SRR8316904Silver flowering stage91.985
SRR8316905Silver flowering stage42.235
SRR8316906Gold flowering stage 47.493
SRR8316907Gold flowering stage 48.268
SRR8316908Gold flowering stage 49.208
SRP132670SRR6706286Control39.187
SRR6706287Light intensity 50%98.143
SRR6706288Light intensity 20%36.962
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.808
CNS0095593Slightly white alabastrum(diploid) 216.241
CNS0095594Slightly white alabastrum(diploid) 331.353
CNS0095595Whole white alabastrum(diploid) 223.121
CNS0095596Whole white alabastrum(diploid) 34.110
CNS0095597Whole white alabastrum(diploid) 444.441
CNS0095598Silvery flower (diploied) 1107.053
CNS0095599Silvery flower (diploied) 2114.206
CNS0095600Silvery flower (diploied) 384.656
CNS0095601Golden flower (diploid) 186.592
CNS0095602Golden flower (diploid) 289.334
CNS0095603Golden flower (diploid) 388.761
CNS0095604Slightly white alabastrum(tetraploid) 116.706
CNS0095605Slightly white alabastrum(tetraploid) 28.187
CNS0095606Slightly white alabastrum(tetraploid) 349.897
CNS0095607Whole white alabastrum(tetraploid) 172.986
CNS0095608Whole white alabastrum(tetraploid) 27.257
CNS0095609Whole white alabastrum(tetraploid) 39.805
CNS0095610Silvery flower (tetraploid) 1184.665
CNS0095611Silvery flower (tetraploid) 2209.472
CNS0095612Silvery flower (tetraploid) 385.086
CNS0095613Golden flower (tetraploid) 175.918
CNS0095614Golden flower (tetraploid) 2190.459
CNS0095615Golden flower (tetraploid) 3142.259
CRA001975CRR073297Stem 18.812
CRR073298Stem 214.257
CRR073299Stem 317.977
CRR073300Leaf 16.416
CRR073301Leaf 25.791
CRR073302Leaf 36.988
CRR073303Juvenile bud 15.814
CRR073304Juvenile bud 2351.070
CRR073305Juvenile bud 36.750
CRR073306Third green 1121.011
CRR073307Third green 284.746
CRR073308Third green 3101.135
CRR073309Second white 132.915
CRR073310Second white 240.400
CRR073311Second white 334.716
CRR073312Silver flowering 121.912
CRR073313Silver flowering 222.494
CRR073314Silver flowering 319.278
CRR073315Gold flowering 16.968
CRR073316Gold flowering 214.655
CRR073317Gold flowering 310.766
CRR073318Tawny withering 11.051
CRR073319Tawny withering 27.118
CRR073320Tawny withering 30.313