Gene detail

Detail information of GWHGAAZE009461

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CDP04020.1	0	unnamed protein product [Coffea canephora]
Swissprot	tr\|Q2QYH7\|C14C2_ORYSJ	0	Cytochrome P450 714C2
trEMBL	tr\|A0A068U636\|A0A068U636_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_11 {ECO:0000313\|EMBL:CDP04020.1}
TAIR10	AT5G24910.1	4E-141	cytochrome P450, family 714, subfamily A, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	110688308	110693992	+
GWHAAZE00000002	mRNA	110688308	110693992	+
GWHAAZE00000002	exon	110688308	110688602	+
GWHAAZE00000002	exon	110692160	110692386	+
GWHAAZE00000002	exon	110692556	110693158	+
GWHAAZE00000002	exon	110693567	110693992	+
GWHAAZE00000002	CDS	110688308	110688602	+
GWHAAZE00000002	CDS	110692160	110692386	+
GWHAAZE00000002	CDS	110692556	110693158	+
GWHAAZE00000002	CDS	110693567	110693992	+

Transcript Sequence
>GWHTAAZE009471 ATGGGTATGGAGGTTGAATTGGTACTTAAAATCTGTGTATCTATTGGTTTGATTGGTGTATTGGGATTGTTTTTGCGTATTTATAACGCGCTGGTGAAAAGGCCGGCGAAGCTCCGGCGGGTTCTGGAGAAACAGGGGGTGGGAGGTCCATCGCAGAGGGTGTTGCTGGGAAACATTTTGGAGATAAAGAGGTCGCGTAATGCCACCGCCAAGCCTCCGATGTGTGGTGCTCCGGCGGATCATAACTGTTCTAATGCCCTCTTCTCTTTTTTTGAGAATTGGCAAAAGCAATACGGTGAAGTATTCATGTTTGCTCTTGGTAATACTCAAATCTTACATGTGACCAAACCTGATATGGTGAAAGAAATAACCACGTGCACATCTTTGGACTTGGGCAAACCTTCTTATCAAGCGAAAGAGCGTGGTTCATTACTTGGACAAGGCATTTTAACTTCGAATGGACCTCATTGGGCTCATCAGAGGAAAATCATCGCGCCTGAATTATACATGGACAAAGTCAAGGGAATGTATAGCTTAATTACGGATTCGACAGTTAAGTTGTTGGACTCATGGAAGAGTATAATCGAGTCTAGTGGCGGGATTGCTGATATCAAAATTGATCCGCACATGAGAAGTTTCTCTGGAGATGTGATATCGAGAGCTTGCTTTGGTAGCAATTTTTCTAAGGGAGAAGAGATTTTCTTGAAACTTAGAGCTCTTCAAGAAGCCGCTTCCAAGAAAGTTTTGTCTACTGGAATCCCTGGCATGAGGTACCTTCCTACTAAGGGAAATAGAGAACAATGGGCACTAGAGAAGGAGATCCACACATTGATTTTACAAGTAGTAAAGGAGAGAAACGAAGCAGGGTACGAGAAGGACCTTTTGCAATCGGTTCTTGAAGGTGCTAAAAATAGTGACTTGACCCAAAATGTAATTGATCGTTTCATAGTTGATAATTGCAAAAACATCTACTTGGCTGGGTATGAGACCACTGCAGTTTCGGCCACCTGGTGCCTCATGCTATTAGCTTCACACCCAGAATGGCAAGATCGCATCCGTGCTGAGGCTCTTGAAGTTTGCAAAGGTCAAATCCCAGATGCTGATATGGTCCGCAAAATGAAACAGCTAACGATGGTGATTAATGAATCCCTACGCCTTTATTCTCCGGTAGCAGTGGTCTCAAGAGAGGCCTTCGAGGACATGAAATTTGGGGACATTAACGTACCCAAAGGGGTTAATGTATGGACCTTTGTGTTGACATTGCACACTGACCCAGAAAATTGGGGACCAGACTCTTATAAGTTCAACCCAGACAGATTTGCAAATGGGATCACAGGCGCGTGCAAGTATCCACACTTGTACATGCCATTTGGGGTTGGACCAAGGGTGTGTCTAGGGCAGAACTTGGCATTGGTTGAACTCAAAATACTTATCTCTCTCATTGTGTCCAATTTCTCTTTCTCTCTTTCCCCAACATATATTCACTCCCCTGCTTTGAATTTGGTGATAGAGCCTGAACATGGAGTCAACTTGTATGTGAAGAAGTTGTGA

Network for GWHGAAZE009461

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	84	491	2.90E-81

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.177
	SRR3591706	second leaf	1.520
	SRR3591707	mature leaf	0.077
	SRR3591708	Shoot apex	0.330
	SRR3591709	Stem	0.338
	SRR3591710	White floral bud	1.984
	SRR3591711	White flower	0.615
	SRR3591712	Green floral bud	3.095
	SRR3591713	Yellow flower	6.559
SRP173429	SRR8316895	Juvenile bud stage	0.349
	SRR8316896	Juvenile bud stage	0.845
	SRR8316897	Juvenile bud stage	0.138
	SRR8316894	Third green stage	0.975
	SRR8316900	Third green stage	11.237
	SRR8316901	Third green stage	8.770
	SRR8316898	Complete white stage	2.430
	SRR8316899	Complete white stage	23.942
	SRR8316903	Complete white stage	2.944
	SRR8316902	Silver flowering stage	1.457
	SRR8316904	Silver flowering stage	2.506
	SRR8316905	Silver flowering stage	1.243
	SRR8316906	Gold flowering stage	12.459
	SRR8316907	Gold flowering stage	5.119
	SRR8316908	Gold flowering stage	12.803
SRP132670	SRR6706286	Control	6.709
	SRR6706287	Light intensity 50%	8.056
	SRR6706288	Light intensity 20%	10.385
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.133
	CNS0095593	Slightly white alabastrum(diploid) 2	1.610
	CNS0095594	Slightly white alabastrum(diploid) 3	0.991
	CNS0095595	Whole white alabastrum(diploid) 2	1.568
	CNS0095596	Whole white alabastrum(diploid) 3	2.129
	CNS0095597	Whole white alabastrum(diploid) 4	2.595
	CNS0095598	Silvery flower (diploied) 1	0.286
	CNS0095599	Silvery flower (diploied) 2	0.275
	CNS0095600	Silvery flower (diploied) 3	1.399
	CNS0095601	Golden flower (diploid) 1	1.038
	CNS0095602	Golden flower (diploid) 2	2.117
	CNS0095603	Golden flower (diploid) 3	2.442
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.875
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.975
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.127
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.057
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.606
	CNS0095609	Whole white alabastrum(tetraploid) 3	3.913
	CNS0095610	Silvery flower (tetraploid) 1	0.886
	CNS0095611	Silvery flower (tetraploid) 2	0.088
	CNS0095612	Silvery flower (tetraploid) 3	0.900
	CNS0095613	Golden flower (tetraploid) 1	2.446
	CNS0095614	Golden flower (tetraploid) 2	6.289
	CNS0095615	Golden flower (tetraploid) 3	0.088
CRA001975	CRR073297	Stem 1	2.220
	CRR073298	Stem 2	2.331
	CRR073299	Stem 3	1.794
	CRR073300	Leaf 1	14.147
	CRR073301	Leaf 2	8.797
	CRR073302	Leaf 3	10.285
	CRR073303	Juvenile bud 1	27.724
	CRR073304	Juvenile bud 2	24.085
	CRR073305	Juvenile bud 3	18.961
	CRR073306	Third green 1	6.005
	CRR073307	Third green 2	4.167
	CRR073308	Third green 3	5.222
	CRR073309	Second white 1	1.705
	CRR073310	Second white 2	2.288
	CRR073311	Second white 3	1.476
	CRR073312	Silver flowering 1	1.942
	CRR073313	Silver flowering 2	1.799
	CRR073314	Silver flowering 3	0.761
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.325
	CRR073318	Tawny withering 1	11.331
	CRR073319	Tawny withering 2	20.657
	CRR073320	Tawny withering 3	1.316