Gene detail

Detail information of GWHGAAZE009432

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009374386.1	0	PREDICTED: taxadiene 5-alpha hydroxylase-like [Pyrus x bretschneideri]
Swissprot	tr\|Q6WG30\|T5H_TAXCU	1E-114	Taxadiene 5-alpha hydroxylase
trEMBL	tr\|M5VY61\|M5VY61_PRUPE	0	Uncharacterized protein {ECO:0000313\|EMBL:EMJ06369.1}
TAIR10	AT2G42850.1	5E-77	cytochrome P450, family 718

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	110175909	110178579	+
GWHAAZE00000002	mRNA	110175909	110178579	+
GWHAAZE00000002	exon	110175909	110176306	+
GWHAAZE00000002	exon	110177032	110177600	+
GWHAAZE00000002	exon	110177911	110178104	+
GWHAAZE00000002	exon	110178271	110178579	+
GWHAAZE00000002	CDS	110175909	110176306	+
GWHAAZE00000002	CDS	110177032	110177600	+
GWHAAZE00000002	CDS	110177911	110178104	+
GWHAAZE00000002	CDS	110178271	110178579	+

Transcript Sequence
>GWHTAAZE009442 AGAGATATTGTTGCCACTGGATCATCAATGTCTATCATAGCCATTTTAGCAATTACTCTCGTTTCGACTTTCTTCATACTAAAGCTGTTTTTCAGAAATGTTTTAGGACCCAAAAATTTGCCCAAAGGATCACTAGGGTACCCTCTGATAGGAGAGACCTTTAGCTTTCTTCAAGCTCAAAAGAAAGACCAAGGTCCCCAATGGATAAACCAGAGGGTGGCTAAATATGGGCCTGTCTTCAAAACCTCCTTAATGGGTTCCCCAACGCTTATAATTGTTGGTCAGGCCGGTAACAAGTTTATTCTTGGTTCAGATGAGGATGTTCTTGCTGCCAAACAGCCCAAGACCCTATCCAGCATTGCTGGCAAGTACAACATCTTTGAGCTCACTGGATCAAGGTACAAACTGATAAAGGGAGCAATGGTAAGCTTCCTAAAGCCAGAAAGCCTACAAAACTACATCAAACAGATGGATGAATTGGTCACATCTCTCTTACTACAAGAGACCAAAGAGAACGACACAATTCCAACGGTAACTTTCATGAAGAAACTCACATTCAACCTTGCTTGTAACATTATCTTCGGCATTCCAGATGAGCAAACTCAGGAATCTCTTCGTGTCAATTTCGCTATAGCCTTCAAGGCCGTTTGGTCTCTTCCGCTGAATTTCATTGGGACCACTTACTGGCGTGGCCTAAGAGCGAGATCAAGAGTTAGTAACATGATTTTGACGATTATGAAGATGAAAAAAGAGGATATGTTAATGGGAAATTTGACACGTACGAGTGATGTAATCTCGTGCCTTTTAGCACTTCAAGCTGAAAATGAAGAGGAGATTAGTGAAGAAATGATTGTGGATAATTTTTTTACACTTATGATTGCTAGCCATGATACATCTGCAATTTTGTTGAGTTTGATGGTATGGAAGATGTCTAAAGATCCTGAGATTTACAAGAAGGTTTTGGAAGAACAAATGGGGATTCTGAAAAACATAGAAGGAAGAGAAGAGAGGCAATTAACATGGGAAGATATACAAAAGATGAAATACACATGGAGAGTAGCACAAGAGTTGATGAGAATGATTCCCCCAGTGTTTGGCAGCTTTAGAAAAGCACTCAAGGACACTAGCTTTGGTGGCTACGACATCCCCAAAGGATGGCAGATATTTTGGACAGCCTATGGAACACACATGAGCGAGGAAGTGTTTGAAAGTCCAATGGAGTTTGATCCGTTAAGGTTCGACAACTTAACCAAACCCATCCCACCCTATGCTTACATACCATTTGGAGGAGGACTACACAGTTGCATAGGGATTGAGTTTGCCAGAGTTGAAACCTTAACCACAATTCACAAGCTGGTCACTATGTACCAATGGTCAACCTTGTATGCCGATGAAGTCATCACCCGCCAACCTATGCCGTATCCATCTATGGGTCTCCCTATCAAGGTCAAGCCAATTATTCCATCATAA

Network for GWHGAAZE009432

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	42	473	1.80E-69

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.128
	SRR3591706	second leaf	13.750
	SRR3591707	mature leaf	55.084
	SRR3591708	Shoot apex	0.936
	SRR3591709	Stem	0.006
	SRR3591710	White floral bud	5.838
	SRR3591711	White flower	2.572
	SRR3591712	Green floral bud	6.525
	SRR3591713	Yellow flower	0.639
SRP173429	SRR8316895	Juvenile bud stage	2.083
	SRR8316896	Juvenile bud stage	6.157
	SRR8316897	Juvenile bud stage	4.175
	SRR8316894	Third green stage	1.866
	SRR8316900	Third green stage	2.375
	SRR8316901	Third green stage	2.620
	SRR8316898	Complete white stage	0.744
	SRR8316899	Complete white stage	0.722
	SRR8316903	Complete white stage	0.618
	SRR8316902	Silver flowering stage	0.699
	SRR8316904	Silver flowering stage	0.470
	SRR8316905	Silver flowering stage	0.455
	SRR8316906	Gold flowering stage	1.339
	SRR8316907	Gold flowering stage	0.776
	SRR8316908	Gold flowering stage	0.585
SRP132670	SRR6706286	Control	2.821
	SRR6706287	Light intensity 50%	3.262
	SRR6706288	Light intensity 20%	2.870
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.463
	CNS0095593	Slightly white alabastrum(diploid) 2	0.720
	CNS0095594	Slightly white alabastrum(diploid) 3	4.007
	CNS0095595	Whole white alabastrum(diploid) 2	0.736
	CNS0095596	Whole white alabastrum(diploid) 3	0.744
	CNS0095597	Whole white alabastrum(diploid) 4	1.104
	CNS0095598	Silvery flower (diploied) 1	1.508
	CNS0095599	Silvery flower (diploied) 2	0.568
	CNS0095600	Silvery flower (diploied) 3	0.763
	CNS0095601	Golden flower (diploid) 1	0.957
	CNS0095602	Golden flower (diploid) 2	0.220
	CNS0095603	Golden flower (diploid) 3	0.273
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.202
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.295
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.099
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.732
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.873
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.739
	CNS0095610	Silvery flower (tetraploid) 1	1.531
	CNS0095611	Silvery flower (tetraploid) 2	1.490
	CNS0095612	Silvery flower (tetraploid) 3	1.750
	CNS0095613	Golden flower (tetraploid) 1	1.235
	CNS0095614	Golden flower (tetraploid) 2	1.944
	CNS0095615	Golden flower (tetraploid) 3	0.944
CRA001975	CRR073297	Stem 1	3.738
	CRR073298	Stem 2	5.193
	CRR073299	Stem 3	1.474
	CRR073300	Leaf 1	0.790
	CRR073301	Leaf 2	1.640
	CRR073302	Leaf 3	0.693
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.159
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.440
	CRR073307	Third green 2	0.204
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.812
	CRR073311	Second white 3	0.174
	CRR073312	Silver flowering 1	0.033
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.049
	CRR073315	Gold flowering 1	4.941
	CRR073316	Gold flowering 2	8.825
	CRR073317	Gold flowering 3	1.139
	CRR073318	Tawny withering 1	0.707
	CRR073319	Tawny withering 2	3.571
	CRR073320	Tawny withering 3	0.292