Detail information of GWHGAAZE009366


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011098894.11.1132E-102PREDICTED: probable phytol kinase 3, chloroplastic [Sesamum indicum]
Swissprottr|Q2N2K0|PHYK3_SOYBN3E-90Probable phytol kinase 3, chloroplastic (Precursor)
trEMBLtr|A0A022RY24|A0A022RY24_ERYGU2E-100Uncharacterized protein {ECO:0000313|EMBL:EYU45412.1}
TAIR10AT5G58560.14E-62Phosphatidate cytidylyltransferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene108784530108787069-
GWHAAZE00000002mRNA108784530108787069-
GWHAAZE00000002exon108784530108784707-
GWHAAZE00000002exon108784792108784906-
GWHAAZE00000002exon108786097108786212-
GWHAAZE00000002exon108786873108787069-
GWHAAZE00000002CDS108786873108787069-
GWHAAZE00000002CDS108786097108786212-
GWHAAZE00000002CDS108784792108784906-
GWHAAZE00000002CDS108784530108784707-
Transcript Sequence

Network for GWHGAAZE009366

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15892FOLK Biosynthesis of secondary metabolites map01110
Terpenoid backbone biosynthesismap00900

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf26.993
SRR3591706second leaf34.459
SRR3591707mature leaf18.411
SRR3591708Shoot apex79.705
SRR3591709Stem39.229
SRR3591710White floral bud30.409
SRR3591711White flower34.898
SRR3591712Green floral bud36.935
SRR3591713Yellow flower25.786
SRP173429 SRR8316895Juvenile bud stage 36.400
SRR8316896Juvenile bud stage 45.155
SRR8316897Juvenile bud stage 21.941
SRR8316894Third green stage 15.775
SRR8316900Third green stage 52.296
SRR8316901Third green stage 47.583
SRR8316898Complete white stage 11.778
SRR8316899Complete white stage 59.130
SRR8316903Complete white stage 14.248
SRR8316902Silver flowering stage5.399
SRR8316904Silver flowering stage9.161
SRR8316905Silver flowering stage4.794
SRR8316906Gold flowering stage 12.370
SRR8316907Gold flowering stage 14.623
SRR8316908Gold flowering stage 15.106
SRP132670SRR6706286Control32.225
SRR6706287Light intensity 50%29.705
SRR6706288Light intensity 20%39.329
CNP0000432CNS0095592Slightly white alabastrum(diploid) 150.374
CNS0095593Slightly white alabastrum(diploid) 241.850
CNS0095594Slightly white alabastrum(diploid) 348.053
CNS0095595Whole white alabastrum(diploid) 234.773
CNS0095596Whole white alabastrum(diploid) 330.296
CNS0095597Whole white alabastrum(diploid) 430.821
CNS0095598Silvery flower (diploied) 152.004
CNS0095599Silvery flower (diploied) 249.689
CNS0095600Silvery flower (diploied) 346.808
CNS0095601Golden flower (diploid) 166.019
CNS0095602Golden flower (diploid) 252.018
CNS0095603Golden flower (diploid) 354.856
CNS0095604Slightly white alabastrum(tetraploid) 149.932
CNS0095605Slightly white alabastrum(tetraploid) 248.150
CNS0095606Slightly white alabastrum(tetraploid) 373.769
CNS0095607Whole white alabastrum(tetraploid) 134.437
CNS0095608Whole white alabastrum(tetraploid) 231.606
CNS0095609Whole white alabastrum(tetraploid) 347.573
CNS0095610Silvery flower (tetraploid) 136.227
CNS0095611Silvery flower (tetraploid) 244.045
CNS0095612Silvery flower (tetraploid) 311.317
CNS0095613Golden flower (tetraploid) 140.313
CNS0095614Golden flower (tetraploid) 241.131
CNS0095615Golden flower (tetraploid) 312.545
CRA001975CRR073297Stem 157.162
CRR073298Stem 245.278
CRR073299Stem 366.523
CRR073300Leaf 146.133
CRR073301Leaf 242.443
CRR073302Leaf 350.713
CRR073303Juvenile bud 143.249
CRR073304Juvenile bud 237.755
CRR073305Juvenile bud 341.796
CRR073306Third green 15.654
CRR073307Third green 24.189
CRR073308Third green 36.129
CRR073309Second white 16.346
CRR073310Second white 24.504
CRR073311Second white 33.616
CRR073312Silver flowering 12.350
CRR073313Silver flowering 22.293
CRR073314Silver flowering 33.124
CRR073315Gold flowering 119.300
CRR073316Gold flowering 220.964
CRR073317Gold flowering 318.818
CRR073318Tawny withering 128.385
CRR073319Tawny withering 226.516
CRR073320Tawny withering 330.606