Detail information of GWHGAAZE009335


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009783879.14.0218E-131PREDICTED: minor allergen Alt a 7 [Nicotiana sylvestris]
Swissprottr|Q9LUX9|FQRL3_ARATH2E-111Probable NAD(P)H dehydrogenase (quinone) FQR1-like 3 {ECO:0000305}
trEMBLtr|M1CZA3|M1CZA3_SOLTU7E-130Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400078034}
TAIR10AT5G58800.21E-88Quinone reductase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene108073947108077075+
GWHAAZE00000002mRNA108073947108077075+
GWHAAZE00000002exon108073947108073990+
GWHAAZE00000002exon108074180108074273+
GWHAAZE00000002exon108075967108076232+
GWHAAZE00000002exon108076835108077075+
GWHAAZE00000002CDS108073947108073990+
GWHAAZE00000002CDS108074180108074273+
GWHAAZE00000002CDS108075967108076232+
GWHAAZE00000002CDS108076835108077075+
Transcript Sequence

Network for GWHGAAZE009335

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03358.16FMN_red241521.20E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03809wrbA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130

Gene Ontology

GO term OntologyName
GO:0010181molecular_functionFMN binding
GO:0016491molecular_functionoxidoreductase activity
GO:0003955molecular_functionNAD(P)H dehydrogenase (quinone) activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf65.157
SRR3591706second leaf22.395
SRR3591707mature leaf76.031
SRR3591708Shoot apex29.040
SRR3591709Stem115.520
SRR3591710White floral bud46.629
SRR3591711White flower48.407
SRR3591712Green floral bud42.965
SRR3591713Yellow flower133.175
SRP173429 SRR8316895Juvenile bud stage 29.721
SRR8316896Juvenile bud stage 65.938
SRR8316897Juvenile bud stage 15.824
SRR8316894Third green stage 28.314
SRR8316900Third green stage 107.717
SRR8316901Third green stage 118.555
SRR8316898Complete white stage 136.907
SRR8316899Complete white stage 346.680
SRR8316903Complete white stage 203.901
SRR8316902Silver flowering stage55.675
SRR8316904Silver flowering stage71.172
SRR8316905Silver flowering stage42.830
SRR8316906Gold flowering stage 79.479
SRR8316907Gold flowering stage 80.794
SRR8316908Gold flowering stage 59.875
SRP132670SRR6706286Control152.510
SRR6706287Light intensity 50%126.472
SRR6706288Light intensity 20%127.891
CNP0000432CNS0095592Slightly white alabastrum(diploid) 149.496
CNS0095593Slightly white alabastrum(diploid) 272.459
CNS0095594Slightly white alabastrum(diploid) 371.932
CNS0095595Whole white alabastrum(diploid) 266.607
CNS0095596Whole white alabastrum(diploid) 361.808
CNS0095597Whole white alabastrum(diploid) 491.376
CNS0095598Silvery flower (diploied) 183.496
CNS0095599Silvery flower (diploied) 2123.139
CNS0095600Silvery flower (diploied) 3202.439
CNS0095601Golden flower (diploid) 188.685
CNS0095602Golden flower (diploid) 2185.355
CNS0095603Golden flower (diploid) 3181.110
CNS0095604Slightly white alabastrum(tetraploid) 160.308
CNS0095605Slightly white alabastrum(tetraploid) 252.587
CNS0095606Slightly white alabastrum(tetraploid) 371.004
CNS0095607Whole white alabastrum(tetraploid) 164.204
CNS0095608Whole white alabastrum(tetraploid) 265.177
CNS0095609Whole white alabastrum(tetraploid) 398.034
CNS0095610Silvery flower (tetraploid) 1140.876
CNS0095611Silvery flower (tetraploid) 2140.435
CNS0095612Silvery flower (tetraploid) 351.601
CNS0095613Golden flower (tetraploid) 1125.721
CNS0095614Golden flower (tetraploid) 2142.788
CNS0095615Golden flower (tetraploid) 3195.494
CRA001975CRR073297Stem 160.554
CRR073298Stem 268.406
CRR073299Stem 357.227
CRR073300Leaf 1123.646
CRR073301Leaf 2135.380
CRR073302Leaf 3113.257
CRR073303Juvenile bud 1174.255
CRR073304Juvenile bud 2129.340
CRR073305Juvenile bud 3180.443
CRR073306Third green 144.192
CRR073307Third green 267.492
CRR073308Third green 348.336
CRR073309Second white 153.260
CRR073310Second white 227.936
CRR073311Second white 320.163
CRR073312Silver flowering 112.188
CRR073313Silver flowering 29.608
CRR073314Silver flowering 321.324
CRR073315Gold flowering 140.393
CRR073316Gold flowering 243.238
CRR073317Gold flowering 320.231
CRR073318Tawny withering 181.511
CRR073319Tawny withering 279.049
CRR073320Tawny withering 346.876