Detail information of GWHGAAZE009261


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010323576.10PREDICTED: GRAS4 protein isoform X1 [Solanum lycopersicum]
Swissprottr|Q9XE58|SCL14_ARATH3E-168Scarecrow-like protein 14
trEMBLtr|Q00LP5|Q00LP5_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc01g100200.2.1}
TAIR10AT1G07530.11E-139SCARECROW-like 14

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene106615076106616647+
GWHAAZE00000002mRNA106615076106616647+
GWHAAZE00000002exon106615076106616647+
GWHAAZE00000002CDS106615076106616647+
Transcript Sequence

Network for GWHGAAZE009261

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS1475191.10E-108
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.491
SRR3591706second leaf4.160
SRR3591707mature leaf6.507
SRR3591708Shoot apex4.895
SRR3591709Stem10.247
SRR3591710White floral bud0.715
SRR3591711White flower0.986
SRR3591712Green floral bud0.788
SRR3591713Yellow flower3.213
SRP173429 SRR8316895Juvenile bud stage 0.484
SRR8316896Juvenile bud stage 0.531
SRR8316897Juvenile bud stage 0.320
SRR8316894Third green stage 0.107
SRR8316900Third green stage 0.338
SRR8316901Third green stage 0.331
SRR8316898Complete white stage 0.354
SRR8316899Complete white stage 0.757
SRR8316903Complete white stage 0.554
SRR8316902Silver flowering stage0.746
SRR8316904Silver flowering stage0.762
SRR8316905Silver flowering stage0.596
SRR8316906Gold flowering stage 4.877
SRR8316907Gold flowering stage 1.573
SRR8316908Gold flowering stage 3.492
SRP132670SRR6706286Control1.004
SRR6706287Light intensity 50%0.692
SRR6706288Light intensity 20%0.535
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.762
CNS0095593Slightly white alabastrum(diploid) 20.380
CNS0095594Slightly white alabastrum(diploid) 30.221
CNS0095595Whole white alabastrum(diploid) 20.205
CNS0095596Whole white alabastrum(diploid) 30.208
CNS0095597Whole white alabastrum(diploid) 40.463
CNS0095598Silvery flower (diploied) 11.846
CNS0095599Silvery flower (diploied) 21.543
CNS0095600Silvery flower (diploied) 31.229
CNS0095601Golden flower (diploid) 13.835
CNS0095602Golden flower (diploid) 24.701
CNS0095603Golden flower (diploid) 33.545
CNS0095604Slightly white alabastrum(tetraploid) 10.119
CNS0095605Slightly white alabastrum(tetraploid) 20.104
CNS0095606Slightly white alabastrum(tetraploid) 30.404
CNS0095607Whole white alabastrum(tetraploid) 10.165
CNS0095608Whole white alabastrum(tetraploid) 20.019
CNS0095609Whole white alabastrum(tetraploid) 30.095
CNS0095610Silvery flower (tetraploid) 10.471
CNS0095611Silvery flower (tetraploid) 20.396
CNS0095612Silvery flower (tetraploid) 30.503
CNS0095613Golden flower (tetraploid) 10.344
CNS0095614Golden flower (tetraploid) 21.646
CNS0095615Golden flower (tetraploid) 30.252
CRA001975CRR073297Stem 10.077
CRR073298Stem 20.169
CRR073299Stem 30.111
CRR073300Leaf 10.474
CRR073301Leaf 20.511
CRR073302Leaf 30.505
CRR073303Juvenile bud 10.700
CRR073304Juvenile bud 20.483
CRR073305Juvenile bud 31.061
CRR073306Third green 10.215
CRR073307Third green 20.012
CRR073308Third green 30.226
CRR073309Second white 10.723
CRR073310Second white 20.432
CRR073311Second white 30.184
CRR073312Silver flowering 10.945
CRR073313Silver flowering 22.492
CRR073314Silver flowering 32.082
CRR073315Gold flowering 14.544
CRR073316Gold flowering 23.726
CRR073317Gold flowering 35.514
CRR073318Tawny withering 14.517
CRR073319Tawny withering 25.688
CRR073320Tawny withering 31.500