Detail information of GWHGAAZE009242


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007016428.11.1833E-113ENTH/VHS family protein [Theobroma cacao]
Swissprottr|Q67YI9|EPN2_ARATH1E-14Clathrin interactor EPSIN 2
trEMBLtr|A0A061GXX0|A0A061GXX0_THECC4E-114ENTH/VHS family protein {ECO:0000313|EMBL:EOY34047.1}
TAIR10AT3G46540.18E-49ENTH/VHS family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene106204449106207593+
GWHAAZE00000002mRNA106204449106207593+
GWHAAZE00000002exon106204449106204566+
GWHAAZE00000002exon106205710106205824+
GWHAAZE00000002exon106205913106206074+
GWHAAZE00000002exon106207023106207593+
GWHAAZE00000002CDS106204449106204566+
GWHAAZE00000002CDS106205710106205824+
GWHAAZE00000002CDS106205913106206074+
GWHAAZE00000002CDS106207023106207593+
Transcript Sequence

Network for GWHGAAZE009242

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01417.21ENTH391543.40E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12471EPN Endocytosis map04144

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf24.215
SRR3591706second leaf25.585
SRR3591707mature leaf40.740
SRR3591708Shoot apex23.636
SRR3591709Stem42.161
SRR3591710White floral bud26.363
SRR3591711White flower32.624
SRR3591712Green floral bud31.662
SRR3591713Yellow flower29.956
SRP173429 SRR8316895Juvenile bud stage 13.563
SRR8316896Juvenile bud stage 15.863
SRR8316897Juvenile bud stage 5.043
SRR8316894Third green stage 5.731
SRR8316900Third green stage 13.239
SRR8316901Third green stage 11.022
SRR8316898Complete white stage 8.512
SRR8316899Complete white stage 21.377
SRR8316903Complete white stage 10.855
SRR8316902Silver flowering stage5.941
SRR8316904Silver flowering stage11.463
SRR8316905Silver flowering stage5.666
SRR8316906Gold flowering stage 22.198
SRR8316907Gold flowering stage 21.361
SRR8316908Gold flowering stage 17.279
SRP132670SRR6706286Control16.272
SRR6706287Light intensity 50%13.766
SRR6706288Light intensity 20%13.776
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.270
CNS0095593Slightly white alabastrum(diploid) 218.302
CNS0095594Slightly white alabastrum(diploid) 319.113
CNS0095595Whole white alabastrum(diploid) 216.957
CNS0095596Whole white alabastrum(diploid) 312.841
CNS0095597Whole white alabastrum(diploid) 415.235
CNS0095598Silvery flower (diploied) 120.347
CNS0095599Silvery flower (diploied) 221.813
CNS0095600Silvery flower (diploied) 322.416
CNS0095601Golden flower (diploid) 120.782
CNS0095602Golden flower (diploid) 232.980
CNS0095603Golden flower (diploid) 334.252
CNS0095604Slightly white alabastrum(tetraploid) 113.092
CNS0095605Slightly white alabastrum(tetraploid) 213.889
CNS0095606Slightly white alabastrum(tetraploid) 320.569
CNS0095607Whole white alabastrum(tetraploid) 19.278
CNS0095608Whole white alabastrum(tetraploid) 27.926
CNS0095609Whole white alabastrum(tetraploid) 39.498
CNS0095610Silvery flower (tetraploid) 126.212
CNS0095611Silvery flower (tetraploid) 227.864
CNS0095612Silvery flower (tetraploid) 327.308
CNS0095613Golden flower (tetraploid) 127.966
CNS0095614Golden flower (tetraploid) 230.510
CNS0095615Golden flower (tetraploid) 317.234
CRA001975CRR073297Stem 117.766
CRR073298Stem 216.899
CRR073299Stem 316.131
CRR073300Leaf 19.255
CRR073301Leaf 212.279
CRR073302Leaf 39.871
CRR073303Juvenile bud 113.013
CRR073304Juvenile bud 28.135
CRR073305Juvenile bud 318.526
CRR073306Third green 120.292
CRR073307Third green 224.045
CRR073308Third green 319.310
CRR073309Second white 127.207
CRR073310Second white 219.457
CRR073311Second white 312.846
CRR073312Silver flowering 112.097
CRR073313Silver flowering 215.789
CRR073314Silver flowering 37.871
CRR073315Gold flowering 132.346
CRR073316Gold flowering 235.632
CRR073317Gold flowering 329.865
CRR073318Tawny withering 134.959
CRR073319Tawny withering 237.550
CRR073320Tawny withering 320.454