Detail information of GWHGAAZE009231


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004287404.10PREDICTED: heat shock cognate 70 kDa protein-like [Fragaria vesca subsp. vesca]
Swissprottr|P27322|HSP72_SOLLC0Heat shock cognate 70 kDa protein 2
trEMBLtr|W5FP66|W5FP66_WHEAT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_5BS_DFCC9863A.1}
TAIR10AT5G02500.13E-158heat shock cognate protein 70-1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene105931382105932332-
GWHAAZE00000002mRNA105931382105932332-
GWHAAZE00000002exon105931382105932332-
GWHAAZE00000002CDS105931382105932332-
Transcript Sequence

Network for GWHGAAZE009231

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP7012891.20E-128
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03283HSPA1s Spliceosome map03040
Protein processing in endoplasmic reticulummap04141
MAPK signaling pathwaymap04010
Endocytosismap04144
Antigen processing and presentationmap04612
Estrogen signaling pathwaymap04915
Longevity regulating pathway - multiple speciesmap04213

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf61.958
SRR3591706second leaf12.146
SRR3591707mature leaf31.422
SRR3591708Shoot apex47.243
SRR3591709Stem21.756
SRR3591710White floral bud54.320
SRR3591711White flower11.660
SRR3591712Green floral bud111.866
SRR3591713Yellow flower4.962
SRP173429 SRR8316895Juvenile bud stage 468.862
SRR8316896Juvenile bud stage 694.277
SRR8316897Juvenile bud stage 403.570
SRR8316894Third green stage 148.870
SRR8316900Third green stage 489.913
SRR8316901Third green stage 581.045
SRR8316898Complete white stage 82.069
SRR8316899Complete white stage 509.826
SRR8316903Complete white stage 122.749
SRR8316902Silver flowering stage64.377
SRR8316904Silver flowering stage93.325
SRR8316905Silver flowering stage67.408
SRR8316906Gold flowering stage 134.187
SRR8316907Gold flowering stage 113.089
SRR8316908Gold flowering stage 76.589
SRP132670SRR6706286Control281.832
SRR6706287Light intensity 50%260.115
SRR6706288Light intensity 20%261.934
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1113.388
CNS0095593Slightly white alabastrum(diploid) 2131.553
CNS0095594Slightly white alabastrum(diploid) 3110.254
CNS0095595Whole white alabastrum(diploid) 2116.685
CNS0095596Whole white alabastrum(diploid) 3109.160
CNS0095597Whole white alabastrum(diploid) 4110.847
CNS0095598Silvery flower (diploied) 163.340
CNS0095599Silvery flower (diploied) 2373.592
CNS0095600Silvery flower (diploied) 3408.749
CNS0095601Golden flower (diploid) 1401.029
CNS0095602Golden flower (diploid) 2365.194
CNS0095603Golden flower (diploid) 3354.480
CNS0095604Slightly white alabastrum(tetraploid) 1222.910
CNS0095605Slightly white alabastrum(tetraploid) 2139.229
CNS0095606Slightly white alabastrum(tetraploid) 3472.701
CNS0095607Whole white alabastrum(tetraploid) 187.146
CNS0095608Whole white alabastrum(tetraploid) 275.441
CNS0095609Whole white alabastrum(tetraploid) 3360.697
CNS0095610Silvery flower (tetraploid) 157.022
CNS0095611Silvery flower (tetraploid) 2107.762
CNS0095612Silvery flower (tetraploid) 3100.031
CNS0095613Golden flower (tetraploid) 162.852
CNS0095614Golden flower (tetraploid) 257.784
CNS0095615Golden flower (tetraploid) 346.374
CRA001975CRR073297Stem 1135.340
CRR073298Stem 280.825
CRR073299Stem 3101.282
CRR073300Leaf 138.411
CRR073301Leaf 263.380
CRR073302Leaf 339.805
CRR073303Juvenile bud 132.779
CRR073304Juvenile bud 228.189
CRR073305Juvenile bud 346.078
CRR073306Third green 1107.112
CRR073307Third green 292.227
CRR073308Third green 362.596
CRR073309Second white 124.239
CRR073310Second white 235.114
CRR073311Second white 339.053
CRR073312Silver flowering 123.404
CRR073313Silver flowering 237.270
CRR073314Silver flowering 328.333
CRR073315Gold flowering 16.543
CRR073316Gold flowering 21.242
CRR073317Gold flowering 33.486
CRR073318Tawny withering 14.340
CRR073319Tawny withering 24.833
CRR073320Tawny withering 36.509