Detail information of GWHGAAZE009230


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrACU17965.19.7466E-155unknown [Glycine max]
Swissprottr|P09189|HSP7C_PETHY5E-144Heat shock cognate 70 kDa protein
trEMBLtr|C6T813|C6T813_SOYBN4E-155Putative uncharacterized protein {ECO:0000313|EMBL:ACU17965.1}
TAIR10AT3G12580.11E-105heat shock protein 70

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene105930595105931302-
GWHAAZE00000002mRNA105930595105931302-
GWHAAZE00000002exon105930595105931302-
GWHAAZE00000002CDS105930595105931302-
Transcript Sequence

Network for GWHGAAZE009230

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP7012032.30E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03283HSPA1s Spliceosome map03040
Protein processing in endoplasmic reticulummap04141
MAPK signaling pathwaymap04010
Endocytosismap04144
Antigen processing and presentationmap04612
Estrogen signaling pathwaymap04915
Longevity regulating pathway - multiple speciesmap04213

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf81.817
SRR3591706second leaf17.934
SRR3591707mature leaf57.239
SRR3591708Shoot apex85.028
SRR3591709Stem31.204
SRR3591710White floral bud92.515
SRR3591711White flower20.295
SRR3591712Green floral bud219.863
SRR3591713Yellow flower5.724
SRP173429 SRR8316895Juvenile bud stage 792.796
SRR8316896Juvenile bud stage 1256.382
SRR8316897Juvenile bud stage 729.188
SRR8316894Third green stage 237.445
SRR8316900Third green stage 881.124
SRR8316901Third green stage 1118.584
SRR8316898Complete white stage 120.662
SRR8316899Complete white stage 786.918
SRR8316903Complete white stage 180.463
SRR8316902Silver flowering stage112.060
SRR8316904Silver flowering stage120.040
SRR8316905Silver flowering stage110.790
SRR8316906Gold flowering stage 191.545
SRR8316907Gold flowering stage 170.914
SRR8316908Gold flowering stage 117.396
SRP132670SRR6706286Control321.699
SRR6706287Light intensity 50%297.495
SRR6706288Light intensity 20%292.661
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1444.708
CNS0095593Slightly white alabastrum(diploid) 2520.612
CNS0095594Slightly white alabastrum(diploid) 3434.094
CNS0095595Whole white alabastrum(diploid) 2400.720
CNS0095596Whole white alabastrum(diploid) 3439.509
CNS0095597Whole white alabastrum(diploid) 4381.663
CNS0095598Silvery flower (diploied) 1135.783
CNS0095599Silvery flower (diploied) 2637.973
CNS0095600Silvery flower (diploied) 3465.372
CNS0095601Golden flower (diploid) 1895.396
CNS0095602Golden flower (diploid) 2427.772
CNS0095603Golden flower (diploid) 3422.367
CNS0095604Slightly white alabastrum(tetraploid) 1525.517
CNS0095605Slightly white alabastrum(tetraploid) 2452.293
CNS0095606Slightly white alabastrum(tetraploid) 3703.819
CNS0095607Whole white alabastrum(tetraploid) 1289.842
CNS0095608Whole white alabastrum(tetraploid) 2302.405
CNS0095609Whole white alabastrum(tetraploid) 3534.653
CNS0095610Silvery flower (tetraploid) 175.381
CNS0095611Silvery flower (tetraploid) 2121.465
CNS0095612Silvery flower (tetraploid) 3114.453
CNS0095613Golden flower (tetraploid) 1139.319
CNS0095614Golden flower (tetraploid) 290.541
CNS0095615Golden flower (tetraploid) 344.988
CRA001975CRR073297Stem 1155.713
CRR073298Stem 2118.340
CRR073299Stem 3105.919
CRR073300Leaf 162.136
CRR073301Leaf 297.102
CRR073302Leaf 362.955
CRR073303Juvenile bud 149.512
CRR073304Juvenile bud 240.510
CRR073305Juvenile bud 344.072
CRR073306Third green 1109.661
CRR073307Third green 298.882
CRR073308Third green 367.552
CRR073309Second white 124.538
CRR073310Second white 234.098
CRR073311Second white 340.018
CRR073312Silver flowering 131.499
CRR073313Silver flowering 235.519
CRR073314Silver flowering 326.595
CRR073315Gold flowering 16.467
CRR073316Gold flowering 24.286
CRR073317Gold flowering 32.613
CRR073318Tawny withering 17.584
CRR073319Tawny withering 29.389
CRR073320Tawny withering 37.753