Detail information of GWHGAAZE009229


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006424799.10hypothetical protein CICLE_v10027981mg [Citrus clementina]
Swissprottr|P09189|HSP7C_PETHY0Heat shock cognate 70 kDa protein
trEMBLtr|V4UFD6|V4UFD6_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR38039.1}
TAIR10AT3G12580.10heat shock protein 70

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene105902373105903953+
GWHAAZE00000002mRNA105902373105903953+
GWHAAZE00000002exon105902373105903953+
GWHAAZE00000002CDS105902373105903953+
Transcript Sequence

Network for GWHGAAZE009229

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP7014931.00E-205
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03283HSPA1s Spliceosome map03040
Protein processing in endoplasmic reticulummap04141
MAPK signaling pathwaymap04010
Endocytosismap04144
Antigen processing and presentationmap04612
Estrogen signaling pathwaymap04915
Longevity regulating pathway - multiple speciesmap04213

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.264
SRR3591706second leaf0.659
SRR3591707mature leaf3.257
SRR3591708Shoot apex1.395
SRR3591709Stem12.640
SRR3591710White floral bud10.833
SRR3591711White flower10.706
SRR3591712Green floral bud10.905
SRR3591713Yellow flower4.305
SRP173429 SRR8316895Juvenile bud stage 85.262
SRR8316896Juvenile bud stage 247.921
SRR8316897Juvenile bud stage 86.693
SRR8316894Third green stage 7.963
SRR8316900Third green stage 35.255
SRR8316901Third green stage 58.444
SRR8316898Complete white stage 13.773
SRR8316899Complete white stage 64.871
SRR8316903Complete white stage 28.143
SRR8316902Silver flowering stage44.791
SRR8316904Silver flowering stage41.252
SRR8316905Silver flowering stage38.500
SRR8316906Gold flowering stage 90.588
SRR8316907Gold flowering stage 69.490
SRR8316908Gold flowering stage 44.040
SRP132670SRR6706286Control61.673
SRR6706287Light intensity 50%50.315
SRR6706288Light intensity 20%49.271
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.850
CNS0095593Slightly white alabastrum(diploid) 216.538
CNS0095594Slightly white alabastrum(diploid) 312.962
CNS0095595Whole white alabastrum(diploid) 217.657
CNS0095596Whole white alabastrum(diploid) 315.759
CNS0095597Whole white alabastrum(diploid) 423.849
CNS0095598Silvery flower (diploied) 18.625
CNS0095599Silvery flower (diploied) 2215.508
CNS0095600Silvery flower (diploied) 3171.134
CNS0095601Golden flower (diploid) 1268.461
CNS0095602Golden flower (diploid) 2122.923
CNS0095603Golden flower (diploid) 3121.255
CNS0095604Slightly white alabastrum(tetraploid) 116.725
CNS0095605Slightly white alabastrum(tetraploid) 216.695
CNS0095606Slightly white alabastrum(tetraploid) 328.884
CNS0095607Whole white alabastrum(tetraploid) 112.076
CNS0095608Whole white alabastrum(tetraploid) 214.789
CNS0095609Whole white alabastrum(tetraploid) 330.389
CNS0095610Silvery flower (tetraploid) 130.971
CNS0095611Silvery flower (tetraploid) 248.383
CNS0095612Silvery flower (tetraploid) 353.282
CNS0095613Golden flower (tetraploid) 134.403
CNS0095614Golden flower (tetraploid) 233.054
CNS0095615Golden flower (tetraploid) 39.333
CRA001975CRR073297Stem 13.874
CRR073298Stem 22.569
CRR073299Stem 32.581
CRR073300Leaf 15.675
CRR073301Leaf 26.035
CRR073302Leaf 33.551
CRR073303Juvenile bud 110.852
CRR073304Juvenile bud 210.506
CRR073305Juvenile bud 313.321
CRR073306Third green 135.039
CRR073307Third green 225.879
CRR073308Third green 323.578
CRR073309Second white 18.284
CRR073310Second white 27.288
CRR073311Second white 36.686
CRR073312Silver flowering 12.321
CRR073313Silver flowering 23.432
CRR073314Silver flowering 32.412
CRR073315Gold flowering 12.422
CRR073316Gold flowering 22.134
CRR073317Gold flowering 32.511
CRR073318Tawny withering 15.997
CRR073319Tawny withering 27.677
CRR073320Tawny withering 37.696