Gene detail

Detail information of GWHGAAZE009174

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP44143.1	0	hypothetical protein JCGZ_05610 [Jatropha curcas]
Swissprot	tr\|Q40531\|NTF6_TOBAC	0	Mitogen-activated protein kinase homolog NTF6
trEMBL	tr\|A0A067LA95\|A0A067LA95_JATCU	0	Mitogen-activated protein kinase {ECO:0000256\|RuleBase:RU361165}
TAIR10	AT1G07880.2	9E-166	Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	104400251	104404752	+
GWHAAZE00000002	mRNA	104400251	104404752	+
GWHAAZE00000002	exon	104400251	104400346	+
GWHAAZE00000002	exon	104401422	104401592	+
GWHAAZE00000002	exon	104401888	104402025	+
GWHAAZE00000002	exon	104403037	104403369	+
GWHAAZE00000002	exon	104404118	104404301	+
GWHAAZE00000002	exon	104404577	104404752	+
GWHAAZE00000002	CDS	104400251	104400346	+
GWHAAZE00000002	CDS	104401422	104401592	+
GWHAAZE00000002	CDS	104401888	104402025	+
GWHAAZE00000002	CDS	104403037	104403369	+
GWHAAZE00000002	CDS	104404118	104404301	+
GWHAAZE00000002	CDS	104404577	104404752	+

Transcript Sequence
>GWHTAAZE009184 AAGTACGTTCAGTATAACCTCCTCGGAGATCTATTCGAGGTCTCTTCCAAGTACGTTCCTCCCATTCAACCTGTTGGCCGTGGTGCTTACGGCATCTTTTTATTTCTGACGTACTGGGAATCAACGTCTTGTTACAGCTGTGCAAAAAATGCTGAAACAAAGGAAGAAGTTGCAATCAAGAAAATTGGGAATGCATTTGAAAACAGGATTGATGCCAAAAGGACCCTACGCGAGATCAAACTCCTCAGCCACATGGACCACGACAATATTATCAAAATTAAGGACATTGTAAGGCCACCGGAGAGAGAAAAGTTCAATGATGTTTATATTGTGTATGAGTTAATGGATACTGATCTCTATCAGATAATACGCTCCTCCCAGGCACTGACAGAAGATCACTGTCAGTATTTTCTGTATCAGTTACTCCGGGGACTGAAGTACATACACTCAGCAAATGTTTTGCACCGCGATTTGAAACCAAGCAACCTGCTTCTTAATGCAGACTGTGATCTTAAAATCTGTGACTTTGGGCTTGCTAGAACAACCTCAGAGACAGATTTTATGACGGAATATGTTGTAACACGATGGTATAGGGCCCCAGAGTTGTTACTCAATTGTTCAGAATACACCGCAGCAATTGATATTTGGTCAGTCGGGTGCATTTTAATGGAGATTGTTCAAAGGAAACCTCTTTTTCCGGGTAAAGACTATGTTCAGCAGTTGGGGCTAATAACCGAGCTTCTGGGTTCCCCTGAAGACTCGGATCTTGGATTCCTAAGAAGTGATAATGCTCGGCGATACGTCAAACAGCTTCCTCATTTCCCAAAGAGACCCTTTTTGCAGAAGTTTCCTGATGTGTCCCCATTAATCATCGATCTTGCTGCGAAAATGTTGGTTTTTGATCCATCTAAACGCATAACTGTTGAGGAGGCATTGAATCATCCATTTTTGTCAAGTCTCCACGAGATCAACGAGGAGCCAATTTGCTCTGCTCCTTTTGTATTTGATTTTGAACAATCATCTTTAAGCGAAGAAGATGTGAAGGAGCTTGTTTGGATGGAGTCTTTAAAATTCAACCCAGATAAGATGGTGGAGTAA

Network for GWHGAAZE009174

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	44	317	5.50E-68

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_MAPK

KEGG pathway

KO	Enzyme	pathway	mapID
K04371	ERK, MAPK1_3	Ras signaling pathway	map04014
		Rap1 signaling pathway	map04015
		MAPK signaling pathway	map04010
		MAPK signaling pathway - fly	map04013
		MAPK signaling pathway - yeast	map04011
		ErbB signaling pathway	map04012
		TGF-beta signaling pathway	map04350
		VEGF signaling pathway	map04370
		Apelin signaling pathway	map04371
		TNF signaling pathway	map04668
		HIF-1 signaling pathway	map04066
		FoxO signaling pathway	map04068
		Phospholipase D signaling pathway	map04072
		Sphingolipid signaling pathway	map04071
		cAMP signaling pathway	map04024
		cGMP-PKG signaling pathway	map04022
		PI3K-Akt signaling pathway	map04151
		mTOR signaling pathway	map04150
		Autophagy - animal	map04140
		Cell cycle - yeast	map04111
		Oocyte meiosis	map04114
		Apoptosis	map04210
		Apoptosis - fly	map04214
		Cellular senescence	map04218
		Focal adhesion	map04510
		Adherens junction	map04520
		Gap junction	map04540
		Signaling pathways regulating pluripotency of stem cells	map04550
		Regulation of actin cytoskeleton	map04810
		Platelet activation	map04611
		Toll-like receptor signaling pathway	map04620
		NOD-like receptor signaling pathway	map04621
		C-type lectin receptor signaling pathway	map04625
		Natural killer cell mediated cytotoxicity	map04650
		T cell receptor signaling pathway	map04660
		Th1 and Th2 cell differentiation	map04658
		Th17 cell differentiation	map04659
		IL-17 signaling pathway	map04657
		B cell receptor signaling pathway	map04662
		Fc epsilon RI signaling pathway	map04664
		Fc gamma R-mediated phagocytosis	map04666
		Chemokine signaling pathway	map04062
		Insulin signaling pathway	map04910
		GnRH secretion	map04929
		GnRH signaling pathway	map04912
		Estrogen signaling pathway	map04915
		Progesterone-mediated oocyte maturation	map04914
		Prolactin signaling pathway	map04917
		Oxytocin signaling pathway	map04921
		Relaxin signaling pathway	map04926
		Growth hormone synthesis, secretion and action	map04935
		Thyroid hormone signaling pathway	map04919
		Parathyroid hormone synthesis, secretion and action	map04928
		Melanogenesis	map04916
		Adrenergic signaling in cardiomyocytes	map04261
		Vascular smooth muscle contraction	map04270
		Aldosterone-regulated sodium reabsorption	map04960
		Glutamatergic synapse	map04724
		Cholinergic synapse	map04725
		Serotonergic synapse	map04726
		Long-term potentiation	map04720
		Long-term depression	map04730
		Retrograde endocannabinoid signaling	map04723
		Neurotrophin signaling pathway	map04722
Dorso-ventral axis formation	map04320
Axon guidance	map04360
Osteoclast differentiation	map04380
Circadian entrainment	map04713

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0004707	molecular_function	MAP kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	21.045
	SRR3591706	second leaf	12.558
	SRR3591707	mature leaf	9.183
	SRR3591708	Shoot apex	21.074
	SRR3591709	Stem	18.341
	SRR3591710	White floral bud	8.846
	SRR3591711	White flower	12.553
	SRR3591712	Green floral bud	8.329
	SRR3591713	Yellow flower	5.747
SRP173429	SRR8316895	Juvenile bud stage	8.672
	SRR8316896	Juvenile bud stage	9.663
	SRR8316897	Juvenile bud stage	9.160
	SRR8316894	Third green stage	3.567
	SRR8316900	Third green stage	7.480
	SRR8316901	Third green stage	6.932
	SRR8316898	Complete white stage	3.253
	SRR8316899	Complete white stage	11.638
	SRR8316903	Complete white stage	3.544
	SRR8316902	Silver flowering stage	3.281
	SRR8316904	Silver flowering stage	4.876
	SRR8316905	Silver flowering stage	2.235
	SRR8316906	Gold flowering stage	9.036
	SRR8316907	Gold flowering stage	6.876
	SRR8316908	Gold flowering stage	8.402
SRP132670	SRR6706286	Control	7.901
	SRR6706287	Light intensity 50%	8.766
	SRR6706288	Light intensity 20%	7.638
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	6.923
	CNS0095593	Slightly white alabastrum(diploid) 2	4.766
	CNS0095594	Slightly white alabastrum(diploid) 3	6.297
	CNS0095595	Whole white alabastrum(diploid) 2	4.409
	CNS0095596	Whole white alabastrum(diploid) 3	4.131
	CNS0095597	Whole white alabastrum(diploid) 4	5.094
	CNS0095598	Silvery flower (diploied) 1	4.996
	CNS0095599	Silvery flower (diploied) 2	6.428
	CNS0095600	Silvery flower (diploied) 3	6.428
	CNS0095601	Golden flower (diploid) 1	4.684
	CNS0095602	Golden flower (diploid) 2	5.305
	CNS0095603	Golden flower (diploid) 3	5.005
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.795
	CNS0095605	Slightly white alabastrum(tetraploid) 2	4.044
	CNS0095606	Slightly white alabastrum(tetraploid) 3	9.724
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.707
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.434
	CNS0095609	Whole white alabastrum(tetraploid) 3	3.033
	CNS0095610	Silvery flower (tetraploid) 1	2.783
	CNS0095611	Silvery flower (tetraploid) 2	3.008
	CNS0095612	Silvery flower (tetraploid) 3	12.890
	CNS0095613	Golden flower (tetraploid) 1	1.700
	CNS0095614	Golden flower (tetraploid) 2	3.334
	CNS0095615	Golden flower (tetraploid) 3	1.315
CRA001975	CRR073297	Stem 1	10.660
	CRR073298	Stem 2	8.855
	CRR073299	Stem 3	10.733
	CRR073300	Leaf 1	7.486
	CRR073301	Leaf 2	5.685
	CRR073302	Leaf 3	6.607
	CRR073303	Juvenile bud 1	6.591
	CRR073304	Juvenile bud 2	7.040
	CRR073305	Juvenile bud 3	6.557
	CRR073306	Third green 1	7.342
	CRR073307	Third green 2	7.722
	CRR073308	Third green 3	8.038
	CRR073309	Second white 1	8.100
	CRR073310	Second white 2	9.087
	CRR073311	Second white 3	6.639
	CRR073312	Silver flowering 1	8.112
	CRR073313	Silver flowering 2	7.352
	CRR073314	Silver flowering 3	8.926
	CRR073315	Gold flowering 1	6.618
	CRR073316	Gold flowering 2	12.151
	CRR073317	Gold flowering 3	9.023
	CRR073318	Tawny withering 1	36.555
	CRR073319	Tawny withering 2	32.822
	CRR073320	Tawny withering 3	39.401