Detail information of GWHGAAZE009150


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007009739.11.8792E-110ATP synthase D chain, mitochondrial [Theobroma cacao]
Swissprottr|Q9FT52|ATP5H_ARATH2E-104ATP synthase subunit d, mitochondrial
trEMBLtr|A0A061FUR0|A0A061FUR0_THECC7E-111ATP synthase D chain, mitochondrial {ECO:0000313|EMBL:EOY18549.1}
TAIR10AT3G52300.11E-73ATP synthase D chain, mitochondrial

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene103657241103662274-
GWHAAZE00000002mRNA103657241103662274-
GWHAAZE00000002exon103657241103657342-
GWHAAZE00000002exon103657508103657594-
GWHAAZE00000002exon103658125103658189-
GWHAAZE00000002exon103660352103660433-
GWHAAZE00000002exon103662104103662274-
GWHAAZE00000002CDS103662104103662274-
GWHAAZE00000002CDS103660352103660433-
GWHAAZE00000002CDS103658125103658189-
GWHAAZE00000002CDS103657508103657594-
GWHAAZE00000002CDS103657241103657342-
Transcript Sequence

Network for GWHGAAZE009150

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05873.13Mt_ATP-synt_D151664.70E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02138ATPeF0D, ATP5H, ATP7 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0015986biological_processATP synthesis coupled proton transport
GO:0000276cellular_componentmitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0015078molecular_functionproton transmembrane transporter activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf417.177
SRR3591706second leaf179.321
SRR3591707mature leaf145.613
SRR3591708Shoot apex254.360
SRR3591709Stem319.040
SRR3591710White floral bud375.935
SRR3591711White flower480.542
SRR3591712Green floral bud436.355
SRR3591713Yellow flower420.432
SRP173429 SRR8316895Juvenile bud stage 203.388
SRR8316896Juvenile bud stage 301.256
SRR8316897Juvenile bud stage 162.843
SRR8316894Third green stage 118.122
SRR8316900Third green stage 464.583
SRR8316901Third green stage 448.411
SRR8316898Complete white stage 220.933
SRR8316899Complete white stage 415.866
SRR8316903Complete white stage 287.780
SRR8316902Silver flowering stage268.015
SRR8316904Silver flowering stage304.630
SRR8316905Silver flowering stage172.005
SRR8316906Gold flowering stage 506.327
SRR8316907Gold flowering stage 527.161
SRR8316908Gold flowering stage 564.055
SRP132670SRR6706286Control250.942
SRR6706287Light intensity 50%261.829
SRR6706288Light intensity 20%285.181
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1310.002
CNS0095593Slightly white alabastrum(diploid) 2336.293
CNS0095594Slightly white alabastrum(diploid) 3284.888
CNS0095595Whole white alabastrum(diploid) 2310.391
CNS0095596Whole white alabastrum(diploid) 3356.328
CNS0095597Whole white alabastrum(diploid) 4313.605
CNS0095598Silvery flower (diploied) 1225.689
CNS0095599Silvery flower (diploied) 2264.720
CNS0095600Silvery flower (diploied) 3365.936
CNS0095601Golden flower (diploid) 1199.974
CNS0095602Golden flower (diploid) 2280.232
CNS0095603Golden flower (diploid) 3285.284
CNS0095604Slightly white alabastrum(tetraploid) 1349.504
CNS0095605Slightly white alabastrum(tetraploid) 2328.196
CNS0095606Slightly white alabastrum(tetraploid) 3338.673
CNS0095607Whole white alabastrum(tetraploid) 1324.895
CNS0095608Whole white alabastrum(tetraploid) 2360.434
CNS0095609Whole white alabastrum(tetraploid) 3411.564
CNS0095610Silvery flower (tetraploid) 1468.941
CNS0095611Silvery flower (tetraploid) 2346.523
CNS0095612Silvery flower (tetraploid) 3418.411
CNS0095613Golden flower (tetraploid) 1300.569
CNS0095614Golden flower (tetraploid) 2336.203
CNS0095615Golden flower (tetraploid) 3227.160
CRA001975CRR073297Stem 1326.079
CRR073298Stem 2322.964
CRR073299Stem 3351.926
CRR073300Leaf 1401.219
CRR073301Leaf 2428.838
CRR073302Leaf 3529.921
CRR073303Juvenile bud 1517.267
CRR073304Juvenile bud 2535.255
CRR073305Juvenile bud 3275.163
CRR073306Third green 1592.437
CRR073307Third green 2693.808
CRR073308Third green 3549.903
CRR073309Second white 1350.403
CRR073310Second white 2396.598
CRR073311Second white 3242.593
CRR073312Silver flowering 1202.075
CRR073313Silver flowering 2179.754
CRR073314Silver flowering 3197.894
CRR073315Gold flowering 1192.956
CRR073316Gold flowering 2187.277
CRR073317Gold flowering 3128.599
CRR073318Tawny withering 1346.884
CRR073319Tawny withering 2319.129
CRR073320Tawny withering 3336.342