Detail information of GWHGAAZE009047


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI17130.31.82932E-54unnamed protein product [Vitis vinifera]
Swissprottr|Q681X4|ZAT5_ARATH9E-44Zinc finger protein ZAT5
trEMBLtr|F6GW81|F6GW81_VITVI1E-52Putative uncharacterized protein {ECO:0000313|EMBL:CCB44216.1}
TAIR10AT2G28200.11E-36C2H2-type zinc finger family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene100607413100608066-
GWHAAZE00000002mRNA100607413100608066-
GWHAAZE00000002exon100608015100608066-
GWHAAZE00000002exon100607791100607948-
GWHAAZE00000002exon100607413100607709-
GWHAAZE00000002CDS100608015100608066-
GWHAAZE00000002CDS100607791100607948-
GWHAAZE00000002CDS100607413100607709-
Transcript Sequence

Network for GWHGAAZE009047

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.7zf-C2H2_630545.80E-13
PF13912.7zf-C2H2_6881133.40E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.403
SRR3591706second leaf2.209
SRR3591707mature leaf7.535
SRR3591708Shoot apex1.854
SRR3591709Stem14.358
SRR3591710White floral bud35.922
SRR3591711White flower72.061
SRR3591712Green floral bud6.958
SRR3591713Yellow flower86.491
SRP173429 SRR8316895Juvenile bud stage 5.609
SRR8316896Juvenile bud stage 15.790
SRR8316897Juvenile bud stage 5.249
SRR8316894Third green stage 5.285
SRR8316900Third green stage 8.220
SRR8316901Third green stage 8.521
SRR8316898Complete white stage 39.089
SRR8316899Complete white stage 9.256
SRR8316903Complete white stage 50.336
SRR8316902Silver flowering stage48.157
SRR8316904Silver flowering stage54.734
SRR8316905Silver flowering stage39.561
SRR8316906Gold flowering stage 101.760
SRR8316907Gold flowering stage 103.736
SRR8316908Gold flowering stage 89.921
SRP132670SRR6706286Control14.870
SRR6706287Light intensity 50%15.413
SRR6706288Light intensity 20%12.491
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.440
CNS0095593Slightly white alabastrum(diploid) 26.807
CNS0095594Slightly white alabastrum(diploid) 316.648
CNS0095595Whole white alabastrum(diploid) 22.870
CNS0095596Whole white alabastrum(diploid) 37.612
CNS0095597Whole white alabastrum(diploid) 48.382
CNS0095598Silvery flower (diploied) 164.403
CNS0095599Silvery flower (diploied) 257.658
CNS0095600Silvery flower (diploied) 3120.605
CNS0095601Golden flower (diploid) 155.167
CNS0095602Golden flower (diploid) 288.615
CNS0095603Golden flower (diploid) 387.801
CNS0095604Slightly white alabastrum(tetraploid) 15.831
CNS0095605Slightly white alabastrum(tetraploid) 26.603
CNS0095606Slightly white alabastrum(tetraploid) 36.449
CNS0095607Whole white alabastrum(tetraploid) 15.366
CNS0095608Whole white alabastrum(tetraploid) 24.173
CNS0095609Whole white alabastrum(tetraploid) 39.562
CNS0095610Silvery flower (tetraploid) 173.965
CNS0095611Silvery flower (tetraploid) 278.734
CNS0095612Silvery flower (tetraploid) 3188.353
CNS0095613Golden flower (tetraploid) 1123.091
CNS0095614Golden flower (tetraploid) 272.518
CNS0095615Golden flower (tetraploid) 3172.569
CRA001975CRR073297Stem 126.864
CRR073298Stem 225.268
CRR073299Stem 341.072
CRR073300Leaf 111.794
CRR073301Leaf 210.123
CRR073302Leaf 314.086
CRR073303Juvenile bud 17.757
CRR073304Juvenile bud 215.581
CRR073305Juvenile bud 310.931
CRR073306Third green 1160.186
CRR073307Third green 2111.697
CRR073308Third green 3103.210
CRR073309Second white 1262.846
CRR073310Second white 2203.979
CRR073311Second white 3185.920
CRR073312Silver flowering 1205.274
CRR073313Silver flowering 2188.844
CRR073314Silver flowering 3175.759
CRR073315Gold flowering 18.774
CRR073316Gold flowering 28.594
CRR073317Gold flowering 38.603
CRR073318Tawny withering 116.707
CRR073319Tawny withering 24.628
CRR073320Tawny withering 318.500