Detail information of GWHGAAZE008893


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002275098.10PREDICTED: BEL1-like homeodomain protein 1 [Vitis vinifera]
Swissprottr|Q9SJ56|BLH1_ARATH4E-133BEL1-like homeodomain protein 1
trEMBLtr|F6HAC5|F6HAC5_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB49204.1}
TAIR10AT2G35940.37E-95BEL1-like homeodomain 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9605416596059477-
GWHAAZE00000002mRNA9605416596059477-
GWHAAZE00000002exon9605416596054962-
GWHAAZE00000002exon9605597396056033-
GWHAAZE00000002exon9605653896056911-
GWHAAZE00000002exon9605859696059477-
GWHAAZE00000002CDS9605859696059477-
GWHAAZE00000002CDS9605653896056911-
GWHAAZE00000002CDS9605597396056033-
GWHAAZE00000002CDS9605416596054962-
Transcript Sequence

Network for GWHGAAZE008893

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07526.12POX2103451.20E-49
PF05920.12Homeobox_KN4114501.50E-17
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyHB-BELL

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf82.437
SRR3591706second leaf100.788
SRR3591707mature leaf151.185
SRR3591708Shoot apex52.080
SRR3591709Stem184.557
SRR3591710White floral bud79.011
SRR3591711White flower261.364
SRR3591712Green floral bud35.930
SRR3591713Yellow flower205.197
SRP173429 SRR8316895Juvenile bud stage 20.349
SRR8316896Juvenile bud stage 26.682
SRR8316897Juvenile bud stage 13.560
SRR8316894Third green stage 9.560
SRR8316900Third green stage 16.649
SRR8316901Third green stage 18.927
SRR8316898Complete white stage 20.154
SRR8316899Complete white stage 63.384
SRR8316903Complete white stage 47.683
SRR8316902Silver flowering stage36.803
SRR8316904Silver flowering stage69.085
SRR8316905Silver flowering stage36.615
SRR8316906Gold flowering stage 104.460
SRR8316907Gold flowering stage 104.443
SRR8316908Gold flowering stage 147.905
SRP132670SRR6706286Control45.218
SRR6706287Light intensity 50%38.720
SRR6706288Light intensity 20%33.493
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.782
CNS0095593Slightly white alabastrum(diploid) 216.066
CNS0095594Slightly white alabastrum(diploid) 314.794
CNS0095595Whole white alabastrum(diploid) 214.303
CNS0095596Whole white alabastrum(diploid) 34.841
CNS0095597Whole white alabastrum(diploid) 416.271
CNS0095598Silvery flower (diploied) 176.632
CNS0095599Silvery flower (diploied) 242.552
CNS0095600Silvery flower (diploied) 392.819
CNS0095601Golden flower (diploid) 145.515
CNS0095602Golden flower (diploid) 2142.257
CNS0095603Golden flower (diploid) 3136.653
CNS0095604Slightly white alabastrum(tetraploid) 111.842
CNS0095605Slightly white alabastrum(tetraploid) 29.585
CNS0095606Slightly white alabastrum(tetraploid) 334.532
CNS0095607Whole white alabastrum(tetraploid) 111.103
CNS0095608Whole white alabastrum(tetraploid) 25.604
CNS0095609Whole white alabastrum(tetraploid) 39.023
CNS0095610Silvery flower (tetraploid) 1117.947
CNS0095611Silvery flower (tetraploid) 287.097
CNS0095612Silvery flower (tetraploid) 379.364
CNS0095613Golden flower (tetraploid) 178.270
CNS0095614Golden flower (tetraploid) 2103.603
CNS0095615Golden flower (tetraploid) 3121.641
CRA001975CRR073297Stem 167.736
CRR073298Stem 263.775
CRR073299Stem 363.040
CRR073300Leaf 154.010
CRR073301Leaf 264.965
CRR073302Leaf 334.824
CRR073303Juvenile bud 152.044
CRR073304Juvenile bud 239.775
CRR073305Juvenile bud 392.237
CRR073306Third green 1197.065
CRR073307Third green 2170.699
CRR073308Third green 3209.805
CRR073309Second white 1253.353
CRR073310Second white 2282.225
CRR073311Second white 3325.298
CRR073312Silver flowering 1301.280
CRR073313Silver flowering 2376.207
CRR073314Silver flowering 3296.362
CRR073315Gold flowering 197.424
CRR073316Gold flowering 2171.814
CRR073317Gold flowering 3112.998
CRR073318Tawny withering 1226.112
CRR073319Tawny withering 2149.472
CRR073320Tawny withering 3204.810