Detail information of GWHGAAZE008827


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002532581.10CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
Swissprottr|Q2V452|CIPK3_ARATH0CBL-interacting serine/threonine-protein kinase 3
trEMBLtr|B9T2W2|B9T2W2_RICCO0CBL-interacting serine/threonine-protein kinase, putative {ECO:0000313|EMBL:EEF29798.1}
TAIR10AT2G26980.40CBL-interacting protein kinase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9378056893784911-
GWHAAZE00000002mRNA9378056893784911-
GWHAAZE00000002exon9378056893780642-
GWHAAZE00000002exon9378098293781056-
GWHAAZE00000002exon9378114893781204-
GWHAAZE00000002exon9378158093781693-
GWHAAZE00000002exon9378213893782248-
GWHAAZE00000002exon9378236293782484-
GWHAAZE00000002exon9378295793783046-
GWHAAZE00000002exon9378313893783263-
GWHAAZE00000002exon9378334893783401-
GWHAAZE00000002exon9378442793784507-
GWHAAZE00000002exon9378462793784734-
GWHAAZE00000002exon9378484393784911-
GWHAAZE00000002CDS9378484393784911-
GWHAAZE00000002CDS9378462793784734-
GWHAAZE00000002CDS9378442793784507-
GWHAAZE00000002CDS9378334893783401-
GWHAAZE00000002CDS9378313893783263-
GWHAAZE00000002CDS9378295793783046-
GWHAAZE00000002CDS9378236293782484-
GWHAAZE00000002CDS9378213893782248-
GWHAAZE00000002CDS9378158093781693-
GWHAAZE00000002CDS9378114893781204-
GWHAAZE00000002CDS9378098293781056-
GWHAAZE00000002CDS9378056893780642-
Transcript Sequence

Network for GWHGAAZE008827

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase31899.80E-50
PF03822.15NAF2292881.70E-23
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CAMKL-CHK1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0007165biological_processsignal transduction
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf113.599
SRR3591706second leaf105.609
SRR3591707mature leaf143.351
SRR3591708Shoot apex104.605
SRR3591709Stem58.116
SRR3591710White floral bud195.320
SRR3591711White flower127.502
SRR3591712Green floral bud87.803
SRR3591713Yellow flower90.200
SRP173429 SRR8316895Juvenile bud stage 39.313
SRR8316896Juvenile bud stage 50.434
SRR8316897Juvenile bud stage 23.897
SRR8316894Third green stage 30.594
SRR8316900Third green stage 87.882
SRR8316901Third green stage 100.781
SRR8316898Complete white stage 133.852
SRR8316899Complete white stage 148.818
SRR8316903Complete white stage 175.719
SRR8316902Silver flowering stage123.114
SRR8316904Silver flowering stage191.654
SRR8316905Silver flowering stage95.927
SRR8316906Gold flowering stage 246.204
SRR8316907Gold flowering stage 223.205
SRR8316908Gold flowering stage 253.086
SRP132670SRR6706286Control46.302
SRR6706287Light intensity 50%45.919
SRR6706288Light intensity 20%39.334
CNP0000432CNS0095592Slightly white alabastrum(diploid) 136.435
CNS0095593Slightly white alabastrum(diploid) 250.101
CNS0095594Slightly white alabastrum(diploid) 341.680
CNS0095595Whole white alabastrum(diploid) 241.094
CNS0095596Whole white alabastrum(diploid) 343.026
CNS0095597Whole white alabastrum(diploid) 430.589
CNS0095598Silvery flower (diploied) 1108.416
CNS0095599Silvery flower (diploied) 298.416
CNS0095600Silvery flower (diploied) 3189.769
CNS0095601Golden flower (diploid) 181.801
CNS0095602Golden flower (diploid) 2169.728
CNS0095603Golden flower (diploid) 3163.722
CNS0095604Slightly white alabastrum(tetraploid) 180.380
CNS0095605Slightly white alabastrum(tetraploid) 259.499
CNS0095606Slightly white alabastrum(tetraploid) 3131.776
CNS0095607Whole white alabastrum(tetraploid) 133.111
CNS0095608Whole white alabastrum(tetraploid) 230.829
CNS0095609Whole white alabastrum(tetraploid) 394.016
CNS0095610Silvery flower (tetraploid) 1202.249
CNS0095611Silvery flower (tetraploid) 2164.650
CNS0095612Silvery flower (tetraploid) 3101.248
CNS0095613Golden flower (tetraploid) 197.207
CNS0095614Golden flower (tetraploid) 2208.280
CNS0095615Golden flower (tetraploid) 3183.402
CRA001975CRR073297Stem 123.627
CRR073298Stem 224.429
CRR073299Stem 317.415
CRR073300Leaf 136.336
CRR073301Leaf 226.705
CRR073302Leaf 319.267
CRR073303Juvenile bud 127.806
CRR073304Juvenile bud 239.167
CRR073305Juvenile bud 331.749
CRR073306Third green 157.426
CRR073307Third green 260.211
CRR073308Third green 350.854
CRR073309Second white 143.409
CRR073310Second white 248.987
CRR073311Second white 342.562
CRR073312Silver flowering 129.372
CRR073313Silver flowering 225.256
CRR073314Silver flowering 324.934
CRR073315Gold flowering 114.754
CRR073316Gold flowering 215.724
CRR073317Gold flowering 39.112
CRR073318Tawny withering 118.470
CRR073319Tawny withering 216.857
CRR073320Tawny withering 316.597