Detail information of GWHGAAZE008785


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU46143.19.18876E-32hypothetical protein MIMGU_mgv1a007584mg [Erythranthe guttata]
Swissprottr|Q9SRV1|BPM4_ARATH6E-21BTB/POZ and MATH domain-containing protein 4
trEMBLtr|A0A022S2K0|A0A022S2K0_ERYGU3E-32Uncharacterized protein {ECO:0000313|EMBL:EYU46143.1}
TAIR10AT3G03740.14E-18BTB-POZ and MATH domain 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene9168523291685780+
GWHAAZE00000002mRNA9168523291685780+
GWHAAZE00000002exon9168523291685304+
GWHAAZE00000002exon9168538091685780+
GWHAAZE00000002CDS9168523291685304+
GWHAAZE00000002CDS9168538091685567+
GWHAAZE00000002three_prime_UTR9168556891685780+
Transcript Sequence

Network for GWHGAAZE008785

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10523SPOP Hedgehog signaling pathway map04340
Hedgehog signaling pathway - flymap04341

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.629
SRR3591706second leaf3.662
SRR3591707mature leaf5.175
SRR3591708Shoot apex13.488
SRR3591709Stem7.433
SRR3591710White floral bud10.566
SRR3591711White flower14.915
SRR3591712Green floral bud11.759
SRR3591713Yellow flower9.046
SRP173429 SRR8316895Juvenile bud stage 3.034
SRR8316896Juvenile bud stage 5.217
SRR8316897Juvenile bud stage 1.599
SRR8316894Third green stage 1.340
SRR8316900Third green stage 4.318
SRR8316901Third green stage 4.422
SRR8316898Complete white stage 2.406
SRR8316899Complete white stage 5.499
SRR8316903Complete white stage 2.764
SRR8316902Silver flowering stage1.857
SRR8316904Silver flowering stage2.466
SRR8316905Silver flowering stage1.051
SRR8316906Gold flowering stage 4.247
SRR8316907Gold flowering stage 3.382
SRR8316908Gold flowering stage 3.615
SRP132670SRR6706286Control3.152
SRR6706287Light intensity 50%2.772
SRR6706288Light intensity 20%2.897
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.298
CNS0095593Slightly white alabastrum(diploid) 28.984
CNS0095594Slightly white alabastrum(diploid) 39.355
CNS0095595Whole white alabastrum(diploid) 214.009
CNS0095596Whole white alabastrum(diploid) 38.638
CNS0095597Whole white alabastrum(diploid) 413.962
CNS0095598Silvery flower (diploied) 111.276
CNS0095599Silvery flower (diploied) 27.590
CNS0095600Silvery flower (diploied) 36.030
CNS0095601Golden flower (diploid) 114.190
CNS0095602Golden flower (diploid) 27.020
CNS0095603Golden flower (diploid) 37.882
CNS0095604Slightly white alabastrum(tetraploid) 114.051
CNS0095605Slightly white alabastrum(tetraploid) 215.722
CNS0095606Slightly white alabastrum(tetraploid) 316.784
CNS0095607Whole white alabastrum(tetraploid) 115.852
CNS0095608Whole white alabastrum(tetraploid) 217.626
CNS0095609Whole white alabastrum(tetraploid) 39.611
CNS0095610Silvery flower (tetraploid) 114.401
CNS0095611Silvery flower (tetraploid) 213.051
CNS0095612Silvery flower (tetraploid) 311.317
CNS0095613Golden flower (tetraploid) 114.102
CNS0095614Golden flower (tetraploid) 210.710
CNS0095615Golden flower (tetraploid) 311.852
CRA001975CRR073297Stem 15.414
CRR073298Stem 27.054
CRR073299Stem 36.407
CRR073300Leaf 13.457
CRR073301Leaf 24.724
CRR073302Leaf 33.830
CRR073303Juvenile bud 15.736
CRR073304Juvenile bud 24.108
CRR073305Juvenile bud 35.214
CRR073306Third green 11.898
CRR073307Third green 23.351
CRR073308Third green 33.156
CRR073309Second white 13.756
CRR073310Second white 23.970
CRR073311Second white 32.235
CRR073312Silver flowering 14.578
CRR073313Silver flowering 26.431
CRR073314Silver flowering 33.233
CRR073315Gold flowering 14.313
CRR073316Gold flowering 24.253
CRR073317Gold flowering 33.215
CRR073318Tawny withering 16.353
CRR073319Tawny withering 28.556
CRR073320Tawny withering 35.144