Gene detail

Detail information of GWHGAAZE008766

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP42913.1	9.4831E-143	hypothetical protein JCGZ_23855 [Jatropha curcas]
Swissprot	tr\|Q9ZNT1\|NB5R1_ARATH	6E-132	NADH--cytochrome b5 reductase 1
trEMBL	tr\|A0A067L6P9\|A0A067L6P9_JATCU	4E-143	NADH-cytochrome b5 reductase {ECO:0000256\|RuleBase:RU361226}
TAIR10	AT5G17770.1	3E-105	NADH:cytochrome B5 reductase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	90805103	90812951	-
GWHAAZE00000002	mRNA	90805103	90812951	-
GWHAAZE00000002	exon	90805103	90805619	-
GWHAAZE00000002	exon	90805977	90806063	-
GWHAAZE00000002	exon	90806421	90806486	-
GWHAAZE00000002	exon	90810706	90810747	-
GWHAAZE00000002	exon	90810861	90810941	-
GWHAAZE00000002	exon	90811038	90811115	-
GWHAAZE00000002	exon	90811253	90811343	-
GWHAAZE00000002	exon	90811453	90811610	-
GWHAAZE00000002	exon	90812949	90812951	-
GWHAAZE00000002	CDS	90812949	90812951	-
GWHAAZE00000002	CDS	90811453	90811610	-
GWHAAZE00000002	CDS	90811253	90811343	-
GWHAAZE00000002	CDS	90811038	90811115	-
GWHAAZE00000002	CDS	90810861	90810941	-
GWHAAZE00000002	CDS	90810706	90810747	-
GWHAAZE00000002	CDS	90806421	90806486	-
GWHAAZE00000002	CDS	90805977	90806063	-
GWHAAZE00000002	CDS	90805527	90805619	-
GWHAAZE00000002	three_prime_UTR	90805103	90805526	-

Transcript Sequence
>GWHTAAZE008776 ATGCGTGATATCTTTGTAGGTTGCTTGAACCCTGAGAAGTTTAAGGAATTCAAACTTGTCAAACGGACCGAGCTCAGCCATAATGTGGCCAAGTTTAGATTTGTTCTACCAACACCGACTTCTGTGCTAGGGCTTCCAATTGGACAACATATCAGTTGCAGAGGAAAGGATAGTCAGGGGGATGAAGTTATCAAAGCCTATACTCCAACCACTTTAGACTCGGATGTTGGGTACTTTGAACTAGTTATAAAGATGTATCCGCAAGGAAGGATGTCCCACCACTTCCGAGAATTGCATGAAGGTGCTTCCCTTGCTGTGAAGGGACCCAAGGGACGGTTCAAGTATCAACCTGGCCAAGTTAGGGCTTTTGGGATGCTTGCTGGAGGTACTGGCATTACTCCAATGTTCCAGGTTACTAGAGCCATACTAGAGAACCCGAGAGATGAAACAAACGAAGAGCTGGATAATTTGGCCACGAGTTTCCCTACCCGTTTTAATATATACTATGTGCTAAATCAGCCACCTGAAGGATGGACTGGTGGAGTTGGGTTCGTGTCCAAGGATATAATTGAATCACATTGTCCGTCACCGGCACCTGATGTTCAGATATTGAGGTGTGGACCACCACCAATGAACAAAGCAATGGCAGCTCACCTTGAGGCTCTAGGTTACACTCCCCAGATGCAGTTTCAGTTCTAGTTCTAGATAAAAAGCATATTACTTATGCCACTTCCCTCCAAACATTTTTGTTCTGCGGTCAGTCTCTTATGCGATCGGTTCGCCAAATTTCGTCCTGAGAAAGTCCTGTCTGAACGAGAAACGGCCTTTTTCTTGTTACCATAGACAAACATCAAGCACGAGAGATCATATTATTGTTTCTTTTGATGTTTGGCCAAGCTATTGGTAAACAACCTCTCTATAAGCAAACACAATTATTTTATACCATTCTTGGAATCTTGGTGGTGTGACTTATATACAAGGAGTTGGTTCTTGTTGTACTTACCACTACAAATCTATAATGTAACTTCATGCTACTCGTGTCAAAAATTATCAGAAATACTCATGTAGTTCGAATTTGTGTGTAATTTTGATTGCTATAAATGAATCAGAGAGGTTGTACAAA

Network for GWHGAAZE008766

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00970.25	FAD_binding_6	17	115	1.50E-31
PF00175.22	NAD_binding_1	125	215	7.80E-16

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00326	E1.6.2.2	Amino sugar and nucleotide sugar metabolism	map00520

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0016491	molecular_function	oxidoreductase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	14.352
	SRR3591706	second leaf	6.461
	SRR3591707	mature leaf	6.436
	SRR3591708	Shoot apex	9.592
	SRR3591709	Stem	36.216
	SRR3591710	White floral bud	9.966
	SRR3591711	White flower	9.819
	SRR3591712	Green floral bud	4.877
	SRR3591713	Yellow flower	11.480
SRP173429	SRR8316895	Juvenile bud stage	5.557
	SRR8316896	Juvenile bud stage	11.781
	SRR8316897	Juvenile bud stage	7.198
	SRR8316894	Third green stage	4.265
	SRR8316900	Third green stage	12.634
	SRR8316901	Third green stage	13.590
	SRR8316898	Complete white stage	14.014
	SRR8316899	Complete white stage	12.203
	SRR8316903	Complete white stage	14.181
	SRR8316902	Silver flowering stage	11.003
	SRR8316904	Silver flowering stage	16.183
	SRR8316905	Silver flowering stage	7.066
	SRR8316906	Gold flowering stage	28.292
	SRR8316907	Gold flowering stage	26.302
	SRR8316908	Gold flowering stage	30.530
SRP132670	SRR6706286	Control	20.147
	SRR6706287	Light intensity 50%	19.283
	SRR6706288	Light intensity 20%	16.432
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	14.530
	CNS0095593	Slightly white alabastrum(diploid) 2	12.334
	CNS0095594	Slightly white alabastrum(diploid) 3	12.790
	CNS0095595	Whole white alabastrum(diploid) 2	14.442
	CNS0095596	Whole white alabastrum(diploid) 3	17.410
	CNS0095597	Whole white alabastrum(diploid) 4	17.192
	CNS0095598	Silvery flower (diploied) 1	13.328
	CNS0095599	Silvery flower (diploied) 2	11.945
	CNS0095600	Silvery flower (diploied) 3	18.417
	CNS0095601	Golden flower (diploid) 1	9.563
	CNS0095602	Golden flower (diploid) 2	16.002
	CNS0095603	Golden flower (diploid) 3	16.566
	CNS0095604	Slightly white alabastrum(tetraploid) 1	12.195
	CNS0095605	Slightly white alabastrum(tetraploid) 2	9.769
	CNS0095606	Slightly white alabastrum(tetraploid) 3	8.665
	CNS0095607	Whole white alabastrum(tetraploid) 1	14.128
	CNS0095608	Whole white alabastrum(tetraploid) 2	10.462
	CNS0095609	Whole white alabastrum(tetraploid) 3	12.033
	CNS0095610	Silvery flower (tetraploid) 1	17.108
	CNS0095611	Silvery flower (tetraploid) 2	19.441
	CNS0095612	Silvery flower (tetraploid) 3	30.055
	CNS0095613	Golden flower (tetraploid) 1	11.048
	CNS0095614	Golden flower (tetraploid) 2	14.500
	CNS0095615	Golden flower (tetraploid) 3	18.639
CRA001975	CRR073297	Stem 1	11.668
	CRR073298	Stem 2	12.216
	CRR073299	Stem 3	12.651
	CRR073300	Leaf 1	14.268
	CRR073301	Leaf 2	15.158
	CRR073302	Leaf 3	12.061
	CRR073303	Juvenile bud 1	13.948
	CRR073304	Juvenile bud 2	15.877
	CRR073305	Juvenile bud 3	10.157
	CRR073306	Third green 1	18.576
	CRR073307	Third green 2	21.825
	CRR073308	Third green 3	18.535
	CRR073309	Second white 1	22.156
	CRR073310	Second white 2	23.398
	CRR073311	Second white 3	18.977
	CRR073312	Silver flowering 1	22.180
	CRR073313	Silver flowering 2	23.876
	CRR073314	Silver flowering 3	20.889
	CRR073315	Gold flowering 1	9.623
	CRR073316	Gold flowering 2	12.390
	CRR073317	Gold flowering 3	9.375
	CRR073318	Tawny withering 1	23.409
	CRR073319	Tawny withering 2	19.481
	CRR073320	Tawny withering 3	18.468