Gene detail

Detail information of GWHGAAZE008695

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011005961.1	6.69684E-84	PREDICTED: abscisic-aldehyde oxidase-like isoform X5 [Populus euphratica]
Swissprot	tr\|Q7G9P4\|ALDO3_ARATH	2E-64	Abscisic-aldehyde oxidase
trEMBL	tr\|F6HAB3\|F6HAB3_VITVI	3E-84	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB49192.1}
TAIR10	AT2G27150.2	1E-57	abscisic aldehyde oxidase 3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	88055473	88056273	+
GWHAAZE00000002	mRNA	88055473	88056273	+
GWHAAZE00000002	exon	88055473	88056273	+
GWHAAZE00000002	CDS	88055473	88056273	+

Transcript Sequence
>GWHTAAZE008705 ATGGGTGTTCAATTACTACAACTGAAGGCCTTGGTAATATCAAAGACGGGTTCCACCCAATTCACCAAAGGATGGCCGGTTTTCACGCTTCCCAGTGCGGATTTTGTACTCCGGCAATGTGTGTCTCTCTCTTCTCTGCCCTTGTCAATGCCAAAACACGAACCGGCGGAACCCCTCTGGGATTCTCCAAGATTACTACTTGAAGCTGAAAAGTCTATTTTAGGAAATCTTTGTCGCTGTACTGGATATCGACCCATTGCTGATGCCTGCAAAAGTTTTGCTGCTGATGTTGATATGGAGGATTTGGGCATCAATTCTTTTTGGAAAAAGGGCGAAGATCGGGAAGATAAAGTTAGAAAATTACCTTTTTATGATCCCAATGACGAAATTTGTACGTATCCTGAGTTCTTAAGAAATGAATACAAGTTGTTGAACTTTAAAAGAAATTCTTGGTCTGGGCCTCGTACTATTGAGGAGCTTCAAAGTCTGTTGGAAACAAATTTGGCTTCAAATGGGACAAAGATAAAGATAGTTGTTGGTAACACAGCAACGGGTTATTACAAGGAGCTAGAGCACTATGAAAAATACATTGATTTGAGGTATATCCCTGAGCTCTCTCTTGTTAGAAGAGATCGTACAGGCATTGAAGTTGGAGCAACTGTGACGATATCTAAAGCAATTTTAGCTTTTAAAGAAGAACATAAAGGTGAATTATGCTCCGAGAATGAGCTCTTGTTCAAGAACATTGCCACTCATATGGATAAGATCGCTTCTGAATCTATCCGAACTCAGCTAGTGTAG

Network for GWHGAAZE008695

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00941.22	FAD_binding_5	150	263	4.30E-16

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09842	AAO3	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Carotenoid biosynthesis	map00906

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0050660	molecular_function	flavin adenine dinucleotide binding
GO:0071949	molecular_function	FAD binding
GO:0016491	molecular_function	oxidoreductase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	4.296
	SRR3591706	second leaf	4.257
	SRR3591707	mature leaf	4.575
	SRR3591708	Shoot apex	2.092
	SRR3591709	Stem	3.970
	SRR3591710	White floral bud	1.719
	SRR3591711	White flower	1.635
	SRR3591712	Green floral bud	0.891
	SRR3591713	Yellow flower	0.614
SRP173429	SRR8316895	Juvenile bud stage	0.550
	SRR8316896	Juvenile bud stage	1.716
	SRR8316897	Juvenile bud stage	0.826
	SRR8316894	Third green stage	0.799
	SRR8316900	Third green stage	1.805
	SRR8316901	Third green stage	1.538
	SRR8316898	Complete white stage	0.630
	SRR8316899	Complete white stage	1.933
	SRR8316903	Complete white stage	0.474
	SRR8316902	Silver flowering stage	0.006
	SRR8316904	Silver flowering stage	0.208
	SRR8316905	Silver flowering stage	0.046
	SRR8316906	Gold flowering stage	0.050
	SRR8316907	Gold flowering stage	0.176
	SRR8316908	Gold flowering stage	0.337
SRP132670	SRR6706286	Control	1.849
	SRR6706287	Light intensity 50%	1.142
	SRR6706288	Light intensity 20%	0.910
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.169
	CNS0095593	Slightly white alabastrum(diploid) 2	0.569
	CNS0095594	Slightly white alabastrum(diploid) 3	0.389
	CNS0095595	Whole white alabastrum(diploid) 2	0.722
	CNS0095596	Whole white alabastrum(diploid) 3	0.553
	CNS0095597	Whole white alabastrum(diploid) 4	0.427
	CNS0095598	Silvery flower (diploied) 1	2.151
	CNS0095599	Silvery flower (diploied) 2	0.944
	CNS0095600	Silvery flower (diploied) 3	0.517
	CNS0095601	Golden flower (diploid) 1	1.474
	CNS0095602	Golden flower (diploid) 2	2.523
	CNS0095603	Golden flower (diploid) 3	1.475
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.613
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.749
	CNS0095606	Slightly white alabastrum(tetraploid) 3	3.538
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.413
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.695
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.433
	CNS0095610	Silvery flower (tetraploid) 1	0.856
	CNS0095611	Silvery flower (tetraploid) 2	1.274
	CNS0095612	Silvery flower (tetraploid) 3	0.857
	CNS0095613	Golden flower (tetraploid) 1	0.358
	CNS0095614	Golden flower (tetraploid) 2	0.728
	CNS0095615	Golden flower (tetraploid) 3	0.372
CRA001975	CRR073297	Stem 1	1.109
	CRR073298	Stem 2	0.645
	CRR073299	Stem 3	0.250
	CRR073300	Leaf 1	0.545
	CRR073301	Leaf 2	0.957
	CRR073302	Leaf 3	0.296
	CRR073303	Juvenile bud 1	0.350
	CRR073304	Juvenile bud 2	0.749
	CRR073305	Juvenile bud 3	0.395
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.071
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.028
	CRR073311	Second white 3	0.034
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.063
	CRR073314	Silver flowering 3	0.033
	CRR073315	Gold flowering 1	0.382
	CRR073316	Gold flowering 2	0.967
	CRR073317	Gold flowering 3	0.819
	CRR073318	Tawny withering 1	0.321
	CRR073319	Tawny withering 2	0.389
	CRR073320	Tawny withering 3	0.310