Detail information of GWHGAAZE008662


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrABS11216.14.73917E-37protein disulfide isomerase precursor [Oldenlandia affinis]
Swissprottr|Q9FF55|PDI14_ARATH1E-24Protein disulfide isomerase-like 1-4 (Precursor)
trEMBLtr|A7KY78|A7KY78_OLDAF2E-37Protein disulfide-isomerase {ECO:0000256|RuleBase:RU361130} (Fragment)
TAIR10AT5G60640.33E-22PDI-like 1-4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene8689301586897773+
GWHAAZE00000002mRNA8689301586897773+
GWHAAZE00000002exon8689301586893102+
GWHAAZE00000002exon8689447886894643+
GWHAAZE00000002exon8689471786894835+
GWHAAZE00000002exon8689492786895010+
GWHAAZE00000002exon8689763986897773+
GWHAAZE00000002five_prime_UTR8689301586893102+
GWHAAZE00000002five_prime_UTR8689447886894555+
GWHAAZE00000002CDS8689455686894643+
GWHAAZE00000002CDS8689471786894835+
GWHAAZE00000002CDS8689492786895010+
GWHAAZE00000002CDS8689763986897773+
Transcript Sequence

Network for GWHGAAZE008662

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13848.7Thioredoxin_612972.90E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09580PDIA1, P4HB Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.092
SRR8316896Juvenile bud stage 0.420
SRR8316897Juvenile bud stage 0.116
SRR8316894Third green stage 0.262
SRR8316900Third green stage 0.924
SRR8316901Third green stage 0.294
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.208
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.442
SRR6706287Light intensity 50%0.331
SRR6706288Light intensity 20%0.497
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.134
CNS0095593Slightly white alabastrum(diploid) 20.398
CNS0095594Slightly white alabastrum(diploid) 30.492
CNS0095595Whole white alabastrum(diploid) 20.334
CNS0095596Whole white alabastrum(diploid) 30.113
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.139
CNS0095603Golden flower (diploid) 30.081
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 11.731
CRR073298Stem 20.912
CRR073299Stem 30.000
CRR073300Leaf 10.711
CRR073301Leaf 20.210
CRR073302Leaf 30.220
CRR073303Juvenile bud 10.066
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.161
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.342
CRR073316Gold flowering 20.515
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.192
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.152