Gene detail

Detail information of GWHGAAZE008637

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_002273629.1	PREDICTED: abscisic-aldehyde oxidase-like [Vitis vinifera]
Swissprot	tr\|Q7G9P4\|ALDO3_ARATH	Abscisic-aldehyde oxidase
trEMBL	tr\|F6HAB3\|F6HAB3_VITVI	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB49192.1}
TAIR10	AT2G27150.2	abscisic aldehyde oxidase 3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	85804505	85821102	+
GWHAAZE00000002	mRNA	85804505	85821102	+
GWHAAZE00000002	exon	85804505	85804649	+
GWHAAZE00000002	exon	85806413	85808062	+
GWHAAZE00000002	exon	85809314	85809573	+
GWHAAZE00000002	exon	85810461	85810670	+
GWHAAZE00000002	exon	85811120	85811338	+
GWHAAZE00000002	exon	85813599	85813739	+
GWHAAZE00000002	exon	85815031	85815996	+
GWHAAZE00000002	exon	85816319	85816414	+
GWHAAZE00000002	exon	85816638	85816736	+
GWHAAZE00000002	exon	85818199	85818342	+
GWHAAZE00000002	exon	85821010	85821102	+
GWHAAZE00000002	CDS	85804505	85804649	+
GWHAAZE00000002	CDS	85806413	85808062	+
GWHAAZE00000002	CDS	85809314	85809573	+
GWHAAZE00000002	CDS	85810461	85810670	+
GWHAAZE00000002	CDS	85811120	85811338	+
GWHAAZE00000002	CDS	85813599	85813739	+
GWHAAZE00000002	CDS	85815031	85815996	+
GWHAAZE00000002	CDS	85816319	85816414	+
GWHAAZE00000002	CDS	85816638	85816736	+
GWHAAZE00000002	CDS	85818199	85818342	+
GWHAAZE00000002	CDS	85821010	85821102	+

Transcript Sequence
>GWHTAAZE008647 ATGGAGGAGAGAGAAACAACAAGACTGGTGTTCGCAGTAAATGGAGAGAGATTCGAGGTCTCTGATGTAGACCCATCCACTACTCTACTCCAGTTCTTGCGCTGCCACACTCGGTTCAAGAGTGTCAAGCTTAGCTGCGGTGAAGGTGGTTGTGGTGCTTGTATGGTCCTACTGTCAAAGTATGATCCAGTAGTAAAACAAGTCGAAAACAATAAAGTGAATTCTTGCCTTACACTTCTTTGCAGCATAAATGGGTGTTCAATTACTACAACTGAAGGCCTTGGTAATATCAAAGACGGGTTCCACCCAATTCACCAAAGGATGGCCGGTTTTCACGCTTCCCAGTGCGGATTTTGTACTCCGGCAATGTGTGTCTCTCTCTTCTCTGCCCTTGTCAATGCCAAAAACACGAACCGGCCGGAACCCCCTCTGGGATTCTCCAAGATTACTACTTCGGAAGCTGAAAAGTCTATTTTAGGAAATCTTTGTCGCTGTACTGGATATCGACCCATTGCTGATGCCTGCAAAAGTTTTGCTGCTGATGTTGATATGGAGGATTTGGGCATCAATTCTTTTTGGAAAAAGGGCGAAGATCGGGAAGATAAAGTTAGGAAATTACCTTTTTATGATCCCAATGACGAAATTTGTACGTATCCTGAGTTCTTAAGAAATGAATACAAGTTGTTGAACTTTAAAAGAAATTCTTGGTCTGGGCCTCGTACTATTGAGGAGCTTCAAAGTCTGTTGGAAACAAATTTGGCTTCAAATGGGACAAAGATAAAGATAGTTGTTGGTAACACAGCAACGGGTTATTACAAGGAGCTAGAGCACTATGAAAAATACATTGATTTGAGGTATATCCCTGAGCTCTCTCTTATTAGAAGAGATCGTACAGGCATTGAAGTTGGAGCAACTGTGACGATATCTAAAGCAATTTTAGCTTTTAAAGAAGAACATAAAGGTGAATTATGCTCTGAGAATGAGCTCTTGTTCAACAACATTGCCACTCATATGGATAAGATCGCTTCTGAATCTATCCGGAACTCAGCTAGTGTAGGGGGGAATTTGATAATGGCTCAAAGGCTTTATTTTCCTTCGGATATTGCAACAGTATTTCTTGCAGTAGGAGCAACGGTAAGTATAATGACGGGCCAAAAACGAGAAACGCTTACGTTAGAGGAGTTCTTGGCTAGGCCTCCATTGGACTCCAAAAGTGTGCTTTTGGGTGTGCAAATTCCTTTTCGGAATAAAAAAAGAAAGGGTGTCTCTTCGGAGATTGATTCTAAGTTTCTTTTCGAAACATATCGAGCTTCACCTCGACCCCTTGGAAATGCATTGCCCTATTTAAATGCTGCTTTCATGGTTGTTGTTTCTTTGTCTAAAACTGGAGTTATGGTAAATGAGATTCAGCTGGCTTTTGGTGCTTATGGGACTAAACATGCAATAAGGGCAAGAAAAGTTGAAGAATATCTAGTTGGCAAAGTACTAAGTGTTGGTGTTTTGTATGAAGCTGTTAAATTAGTTAGGGCTACTGTAGTGCCTGAACATGGCACTTCAGATACTGCTTATCGGTCAAGCTTGGCTGTGGGGTTTCTTTTTGAGTTTCTTAGCCCTTTAGTTAATGAATGTACTTATACTTTGCTACAAAATGCTGCGAAAATGAATAATGGGCCATTTGATGATATCGGAAGAATGGGATTGGTGTCATCTGCAAAGCAGGTGGTGGAATCAAGCAGAGAGCACTATCCGGTGGGTCAACCGATTACAAAGTCTGGTGCTGCCCTCCAAGCTTCTGGTGAAGCTATTTATGTGGATGACATTCCTTCACCAGAAAACTGCCTTTATGGAGCGTTTATTCATAGCACAATGCCTTTGGCAAGGGTAAAGGATATCAAATTTGAGTCTAAGACTCTACCAGATGGAGTAACTGATGTTATTTCATTTAAAGATATCCCAAAAGGAGGGGAGAACGTAGGATCTAAGACCATATTTGGTACTGAACCTTTATTTGCTGATGATATTACCAGGTGTGCCGGTCAGCGACTTGCTTTTGTGGTTGCAGATACGCAGAAGCGTGCTGATATGGCTGCAGCCATGGCCATTGTTGATTATGATACTGAAGATTTAGGAGCACCCATTTTAACTGTTGAAGAGGCTGTTGAGAAATCAAGCTTTTATGAAGTCCCTCCTTTCTTATATCCAGAACATGTTGGTGATTTCTCAAAAGGAATGGCTGAAGCTGATCACAAGATTCTCTCAGCTGAGATCAAACTCGGGTCACAATACTATTTCTATATGGAGACACAAACTGCACTTGCGGTTCCAGATGAAGACAATTGCATGGTGGTTTACAGTTCATGTCAGTGCCCCGAGTATGCACACTCTGTTATTGCACAGTGTCTTGGTATACCAGAACATAATGTTCGTGTTGTTACGAGAAGGGTTGGTGGAGGCTTTGGTGGAAAGGCCATAAGAGCTATGCCTATTAGGGTTTATTATGGTGGTTGTGGGTGGAGTCGCCTCTTCTTCTCCTCTCTCCCGTTTGAGCCAACGTCGTCTCTTCTTCTCTTCTTTCCCGTCGACAGCGTCGCCTCTTCTTCTCCTCTCTCCCGTTCTTCTCAAAAGGTTGCTACAGCATCTGCACTTGCAGCCCACAAATTACGGCGCCCGGTCCGAATATATCTCAATCGAAAGACCGATATGATAATGGCAGGAGGAAGACATCCCATGAAGATAACATACAGCACTGGCTTCAGATCCGACGGGAAGATCACAGCTATACACCTGGATATCTTAATCAATGCGGGGATGTCTGCAGACATAAGCCCCATAATGCCACATAACATGTTGGGTGCTCTTAAGAAGTACGATTGGGGTGCTCTATCTTTCGACATAAAAGTATGCAAAACAAACCATTCTAGCAAATCTGCAATGCGAGCCCCGGGGGAAGTGCAAGCTTCTTTTATTGCTGAAGCTATAATAGAAAACGTCGCCTCATATCTTTCAATGGATGTAGATTCAGTCAGAACAAAAAATCTTCACACTTTCGAAAGCCTCAATATATTTTACAAATATTGTGCAGGGGAGCCAGAAGAGTATACTTTGCCTTCTATTATGGATAAATTGGCCATATCTTCAAGATTTGAAAAACGGACTGAAATGATAAAAGAGTATAATCGGTGTAATAAATGGCAAAAAAAGGGTATTTCTCGAGTACCCATTGTGCATCAAGTGACATTGAGACCGACGCCGGGTAAAGTTAGCATTCTTTGGGACGGATCGGTGGTTGTAGAAGTTGGTGGGATTGAGCTGGGACAGGGGCTATGGACTAAGGTGAAACAAATGGCTGCTTTTGGTCTCGGTTTGGTTCAGTGTGATGGAACCGAAGGACTCTTGGAGAAAGTACGGGTCATACAAGCAGACACCTTGAGCTTAGTACAAGGGGGGTTTACTGCAGGGAGCACTACATCAGAATCGAGCTGTGAAGCAGTTCGAATTTGCTGCAGTGTTTTGGTTGAACGACTAATCCCTCTTAAGGAAAAGTTGCAGGAGCAAATGGGTTCTGTTACATGGGACGTCCTTATCCTTCAGGCTCAATACCAATCTGTAAACTTATCAGCAAGTTCTTACTTTGTGCCTGAATTCACTTCAACACACTACCTAAATTATGGTGCTGCAGTGAGTGAGGTGGAAGTAAATATTTTGACTGGAGAAACAAAAATTTTGCGAGCAGATATTATATATGACTGTGGACAGAGCATGAACCCTGCTGTTGATTTGGGACAGATTGAAGGGGCTTTTGTACAAGGAATTGGATTCTTTATGTCCGAAGAATACCTTACAAATTCAGATGGATTGGTGGTTGCAGATGGCACATGGACATACAAAATACCAACAATCGATACCATTCCCAAACAGTTCAATGTGGAGTTGGAGGTTCCAGCTACTATGCCTGTTGTCAAGAAACTCTGTGGATTGGACAATGTGGACAAGTATCTTCAATCCTTGATTATGAAACAGTAG

Network for GWHGAAZE008637

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00111.28	Fer2	12	79	2.30E-08
PF01799.21	Fer2_2	90	175	2.10E-21
PF00941.22	FAD_binding_5	235	414	6.60E-37
PF03450.18	CO_deh_flav_C	434	537	8.60E-21
PF01315.23	Ald_Xan_dh_C	598	707	1.50E-29
PF02738.19	Ald_Xan_dh_C2	735	831	1.70E-32
PF02738.19	Ald_Xan_dh_C2	875	1304	2.70E-124

Protein Sequence

>GWHPAAZE008642
MEERETTRLVFAVNGERFEVSDVDPSTTLLQFLRCHTRFKSVKLSCGEGGCGACMVLLSKYDPVVKQVENNKVNSCLTLLCSINGCSITTTEGLGNIKDGFHPIHQRMAGFHASQCGFCTPAMCVSLFSALVNAKNTNRPEPPLGFSKITTSEAEKSILGNLCRCTGYRPIADACKSFAADVDMEDLGINSFWKKGEDREDKVRKLPFYDPNDEICTYPEFLRNEYKLLNFKRNSWSGPRTIEELQSLLETNLASNGTKIKIVVGNTATGYYKELEHYEKYIDLRYIPELSLIRRDRTGIEVGATVTISKAILAFKEEHKGELCSENELLFNNIATHMDKIASESIRNSASVGGNLIMAQRLYFPSDIATVFLAVGATVSIMTGQKRETLTLEEFLARPPLDSKSVLLGVQIPFRNKKRKGVSSEIDSKFLFETYRASPRPLGNALPYLNAAFMVVVSLSKTGVMVNEIQLAFGAYGTKHAIRARKVEEYLVGKVLSVGVLYEAVKLVRATVVPEHGTSDTAYRSSLAVGFLFEFLSPLVNECTYTLLQNAAKMNNGPFDDIGRMGLVSSAKQVVESSREHYPVGQPITKSGAALQASGEAIYVDDIPSPENCLYGAFIHSTMPLARVKDIKFESKTLPDGVTDVISFKDIPKGGENVGSKTIFGTEPLFADDITRCAGQRLAFVVADTQKRADMAAAMAIVDYDTEDLGAPILTVEEAVEKSSFYEVPPFLYPEHVGDFSKGMAEADHKILSAEIKLGSQYYFYMETQTALAVPDEDNCMVVYSSCQCPEYAHSVIAQCLGIPEHNVRVVTRRVGGGFGGKAIRAMPIRVYYGGCGWSRLFFSSLPFEPTSSLLLFFPVDSVASSSPLSRSSQKVATASALAAHKLRRPVRIYLNRKTDMIMAGGRHPMKITYSTGFRSDGKITAIHLDILINAGMSADISPIMPHNMLGALKKYDWGALSFDIKVCKTNHSSKSAMRAPGEVQASFIAEAIIENVASYLSMDVDSVRTKNLHTFESLNIFYKYCAGEPEEYTLPSIMDKLAISSRFEKRTEMIKEYNRCNKWQKKGISRVPIVHQVTLRPTPGKVSILWDGSVVVEVGGIELGQGLWTKVKQMAAFGLGLVQCDGTEGLLEKVRVIQADTLSLVQGGFTAGSTTSESSCEAVRICCSVLVERLIPLKEKLQEQMGSVTWDVLILQAQYQSVNLSASSYFVPEFTSTHYLNYGAAVSEVEVNILTGETKILRADIIYDCGQSMNPAVDLGQIEGAFVQGIGFFMSEEYLTNSDGLVVADGTWTYKIPTIDTIPKQFNVELEVPATMPVVKKLCGLDNVDKYLQSLIMKQ

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09842	AAO3	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Carotenoid biosynthesis	map00906

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0009055	molecular_function	electron transfer activity
GO:0051536	molecular_function	iron-sulfur cluster binding
GO:0016491	molecular_function	oxidoreductase activity
GO:0005506	molecular_function	iron ion binding
GO:0051537	molecular_function	2 iron, 2 sulfur cluster binding
GO:0071949	molecular_function	FAD binding
GO:0046872	molecular_function	metal ion binding
GO:0050660	molecular_function	flavin adenine dinucleotide binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	11.639
	SRR3591706	second leaf	9.559
	SRR3591707	mature leaf	12.044
	SRR3591708	Shoot apex	6.855
	SRR3591709	Stem	12.478
	SRR3591710	White floral bud	3.768
	SRR3591711	White flower	4.824
	SRR3591712	Green floral bud	4.996
	SRR3591713	Yellow flower	1.896
SRP173429	SRR8316895	Juvenile bud stage	4.478
	SRR8316896	Juvenile bud stage	5.422
	SRR8316897	Juvenile bud stage	2.345
	SRR8316894	Third green stage	2.380
	SRR8316900	Third green stage	5.729
	SRR8316901	Third green stage	5.273
	SRR8316898	Complete white stage	1.487
	SRR8316899	Complete white stage	6.135
	SRR8316903	Complete white stage	2.907
	SRR8316902	Silver flowering stage	0.829
	SRR8316904	Silver flowering stage	1.245
	SRR8316905	Silver flowering stage	0.325
	SRR8316906	Gold flowering stage	1.329
	SRR8316907	Gold flowering stage	1.505
	SRR8316908	Gold flowering stage	1.514
SRP132670	SRR6706286	Control	9.043
	SRR6706287	Light intensity 50%	8.137
	SRR6706288	Light intensity 20%	8.844
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	3.038
	CNS0095593	Slightly white alabastrum(diploid) 2	3.063
	CNS0095594	Slightly white alabastrum(diploid) 3	3.177
	CNS0095595	Whole white alabastrum(diploid) 2	3.017
	CNS0095596	Whole white alabastrum(diploid) 3	2.009
	CNS0095597	Whole white alabastrum(diploid) 4	2.221
	CNS0095598	Silvery flower (diploied) 1	5.701
	CNS0095599	Silvery flower (diploied) 2	5.731
	CNS0095600	Silvery flower (diploied) 3	4.410
	CNS0095601	Golden flower (diploid) 1	5.944
	CNS0095602	Golden flower (diploid) 2	6.654
	CNS0095603	Golden flower (diploid) 3	6.395
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.530
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.283
	CNS0095606	Slightly white alabastrum(tetraploid) 3	3.481
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.048
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.826
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.558
	CNS0095610	Silvery flower (tetraploid) 1	0.965
	CNS0095611	Silvery flower (tetraploid) 2	1.087
	CNS0095612	Silvery flower (tetraploid) 3	0.491
	CNS0095613	Golden flower (tetraploid) 1	0.274
	CNS0095614	Golden flower (tetraploid) 2	0.871
	CNS0095615	Golden flower (tetraploid) 3	0.219
CRA001975	CRR073297	Stem 1	5.575
	CRR073298	Stem 2	5.305
	CRR073299	Stem 3	3.456
	CRR073300	Leaf 1	5.206
	CRR073301	Leaf 2	5.009
	CRR073302	Leaf 3	4.172
	CRR073303	Juvenile bud 1	3.838
	CRR073304	Juvenile bud 2	3.290
	CRR073305	Juvenile bud 3	3.951
	CRR073306	Third green 1	0.284
	CRR073307	Third green 2	0.149
	CRR073308	Third green 3	0.701
	CRR073309	Second white 1	0.441
	CRR073310	Second white 2	0.472
	CRR073311	Second white 3	0.486
	CRR073312	Silver flowering 1	0.327
	CRR073313	Silver flowering 2	0.489
	CRR073314	Silver flowering 3	0.612
	CRR073315	Gold flowering 1	3.413
	CRR073316	Gold flowering 2	7.444
	CRR073317	Gold flowering 3	2.883
	CRR073318	Tawny withering 1	3.299
	CRR073319	Tawny withering 2	3.298
	CRR073320	Tawny withering 3	3.077