Gene detail

Detail information of GWHGAAZE008599

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU35118.1	9.8708E-152	hypothetical protein MIMGU_mgv1a019084mg, partial [Erythranthe guttata]
Swissprot	tr\|Q39238\|TSL_ARATH	8E-131	Serine/threonine-protein kinase TOUSLED
trEMBL	tr\|A0A022R626\|A0A022R626_ERYGU	4E-152	Uncharacterized protein {ECO:0000313\|EMBL:EYU35118.1} (Fragment)
TAIR10	AT5G20930.1	6E-109	Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	84104179	84110953	+
GWHAAZE00000002	mRNA	84104179	84110953	+
GWHAAZE00000002	exon	84104179	84104343	+
GWHAAZE00000002	exon	84105505	84105715	+
GWHAAZE00000002	exon	84106809	84106842	+
GWHAAZE00000002	exon	84108106	84108198	+
GWHAAZE00000002	exon	84108783	84108837	+
GWHAAZE00000002	exon	84109640	84109801	+
GWHAAZE00000002	exon	84110858	84110953	+
GWHAAZE00000002	CDS	84104179	84104343	+
GWHAAZE00000002	CDS	84105505	84105715	+
GWHAAZE00000002	CDS	84106809	84106842	+
GWHAAZE00000002	CDS	84108106	84108198	+
GWHAAZE00000002	CDS	84108783	84108837	+
GWHAAZE00000002	CDS	84109640	84109801	+
GWHAAZE00000002	CDS	84110858	84110953	+

Transcript Sequence
>GWHTAAZE008609 ATGCGGGAAAGAGATCGCTATGAAATAGAGAAGGGAAGGCTAATCCGTGAAATGAAACGGTTACGAGATGAAGATGGATCCCGTTTTAACAATTTTCAGATTTTGAACCATCGATATGCCCTTTTGAACCTTCTCGGAAAAGGAGGATTCAGTGAAGTTTACAAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCATGTAAGCTTCATGGTTTGAATGCTCAGTGGAGTGAAGAGAAGAAACAGAGTTACATAAGACATGCAATTCGCGAGTACAACATTCATAAGACGTTGGTGCATAATCACATTGTACGGCTTTGGGACATTTTTGAGATAGACCAAAATACATTCTGCACTGTTTTGGAGTACTGTAGTGGAATTGCTCGATATGCTGAAGTTAATGAACATAGTTCCTTTGGGCGTCAGTGGCGGGGGCTCTGCATTTTGGGTGGGGGTTGGGACGCTGGTGGTGGGATGATTGAAGTGTCTGGGTTAGGGGGTAGGTATCTCCCTCCAGAGTGCTTTGAGCTAAGCAGGATACCTCTCATTTCATCAAAGGTCGATGTTTGGTCTGCTGGTATTTTATTGTACCAAATGCTGTTTGGCAGACGTCCTTTCGGGCATGACCAGACCCAAGAACGGATTTTACGTGAAGATACCATTATCAAAGCCCGCAAAGTGGAATTCCCTTCCAGACCCTCTGTTTCAAATGAGGCCAAGGAATTTATCCGACGATGTCTAACGTATAACCAGGCAGATAGGCCAGATGTTACAACAATTGCTCAAGATCCATATCTCACATACATGAAGAAGTGA

Network for GWHGAAZE008599

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	40	128	3.40E-13
PF00069.26	Pkinase	168	266	9.60E-18

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	TLK

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0005524	molecular_function	ATP binding
GO:0004672	molecular_function	protein kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	11.330
	SRR3591706	second leaf	6.870
	SRR3591707	mature leaf	5.184
	SRR3591708	Shoot apex	12.043
	SRR3591709	Stem	12.337
	SRR3591710	White floral bud	7.610
	SRR3591711	White flower	9.230
	SRR3591712	Green floral bud	11.045
	SRR3591713	Yellow flower	8.853
SRP173429	SRR8316895	Juvenile bud stage	5.592
	SRR8316896	Juvenile bud stage	7.703
	SRR8316897	Juvenile bud stage	4.536
	SRR8316894	Third green stage	4.278
	SRR8316900	Third green stage	9.591
	SRR8316901	Third green stage	7.681
	SRR8316898	Complete white stage	3.883
	SRR8316899	Complete white stage	11.228
	SRR8316903	Complete white stage	4.527
	SRR8316902	Silver flowering stage	2.744
	SRR8316904	Silver flowering stage	4.507
	SRR8316905	Silver flowering stage	1.366
	SRR8316906	Gold flowering stage	7.035
	SRR8316907	Gold flowering stage	5.903
	SRR8316908	Gold flowering stage	7.211
SRP132670	SRR6706286	Control	5.132
	SRR6706287	Light intensity 50%	5.263
	SRR6706288	Light intensity 20%	5.267
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	4.792
	CNS0095593	Slightly white alabastrum(diploid) 2	5.834
	CNS0095594	Slightly white alabastrum(diploid) 3	6.254
	CNS0095595	Whole white alabastrum(diploid) 2	5.753
	CNS0095596	Whole white alabastrum(diploid) 3	4.048
	CNS0095597	Whole white alabastrum(diploid) 4	4.470
	CNS0095598	Silvery flower (diploied) 1	5.123
	CNS0095599	Silvery flower (diploied) 2	3.572
	CNS0095600	Silvery flower (diploied) 3	7.360
	CNS0095601	Golden flower (diploid) 1	6.309
	CNS0095602	Golden flower (diploid) 2	6.024
	CNS0095603	Golden flower (diploid) 3	7.264
	CNS0095604	Slightly white alabastrum(tetraploid) 1	5.868
	CNS0095605	Slightly white alabastrum(tetraploid) 2	4.639
	CNS0095606	Slightly white alabastrum(tetraploid) 3	10.815
	CNS0095607	Whole white alabastrum(tetraploid) 1	4.575
	CNS0095608	Whole white alabastrum(tetraploid) 2	4.210
	CNS0095609	Whole white alabastrum(tetraploid) 3	5.182
	CNS0095610	Silvery flower (tetraploid) 1	4.872
	CNS0095611	Silvery flower (tetraploid) 2	4.501
	CNS0095612	Silvery flower (tetraploid) 3	5.735
	CNS0095613	Golden flower (tetraploid) 1	1.711
	CNS0095614	Golden flower (tetraploid) 2	2.965
	CNS0095615	Golden flower (tetraploid) 3	2.585
CRA001975	CRR073297	Stem 1	8.521
	CRR073298	Stem 2	5.290
	CRR073299	Stem 3	5.443
	CRR073300	Leaf 1	7.583
	CRR073301	Leaf 2	5.361
	CRR073302	Leaf 3	4.897
	CRR073303	Juvenile bud 1	5.725
	CRR073304	Juvenile bud 2	3.180
	CRR073305	Juvenile bud 3	6.055
	CRR073306	Third green 1	1.537
	CRR073307	Third green 2	2.237
	CRR073308	Third green 3	1.996
	CRR073309	Second white 1	1.726
	CRR073310	Second white 2	3.470
	CRR073311	Second white 3	3.324
	CRR073312	Silver flowering 1	4.285
	CRR073313	Silver flowering 2	1.993
	CRR073314	Silver flowering 3	0.782
	CRR073315	Gold flowering 1	3.341
	CRR073316	Gold flowering 2	3.606
	CRR073317	Gold flowering 3	3.396
	CRR073318	Tawny withering 1	6.467
	CRR073319	Tawny withering 2	5.626
	CRR073320	Tawny withering 3	7.063