Detail information of GWHGAAZE008347


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002283346.10PREDICTED: uncharacterized protein LOC100263956 [Vitis vinifera]
Swissprottr|P42158|KC1D_ARATH2E-54Casein kinase I isoform delta-like
trEMBLtr|F6GUF7|F6GUF7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB43778.1}
TAIR10AT3G13670.10Protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene7060936070617996-
GWHAAZE00000002mRNA7060936070617996-
GWHAAZE00000002exon7061745870617996-
GWHAAZE00000002exon7061585670615984-
GWHAAZE00000002exon7061565970615732-
GWHAAZE00000002exon7061548570615554-
GWHAAZE00000002exon7061534570615400-
GWHAAZE00000002exon7061458470614655-
GWHAAZE00000002exon7061438170614475-
GWHAAZE00000002exon7061420470614270-
GWHAAZE00000002exon7061396570614094-
GWHAAZE00000002exon7061349170613709-
GWHAAZE00000002exon7061325170613393-
GWHAAZE00000002exon7061283870613012-
GWHAAZE00000002exon7061246270612552-
GWHAAZE00000002exon7061169570611852-
GWHAAZE00000002exon7061065970610847-
GWHAAZE00000002exon7060936070609772-
GWHAAZE00000002five_prime_UTR7061780070617996-
GWHAAZE00000002CDS7061745870617799-
GWHAAZE00000002CDS7061585670615984-
GWHAAZE00000002CDS7061565970615732-
GWHAAZE00000002CDS7061548570615554-
GWHAAZE00000002CDS7061534570615400-
GWHAAZE00000002CDS7061458470614655-
GWHAAZE00000002CDS7061438170614475-
GWHAAZE00000002CDS7061420470614270-
GWHAAZE00000002CDS7061396570614094-
GWHAAZE00000002CDS7061349170613709-
GWHAAZE00000002CDS7061325170613393-
GWHAAZE00000002CDS7061283870613012-
GWHAAZE00000002CDS7061246270612552-
GWHAAZE00000002CDS7061169570611852-
GWHAAZE00000002CDS7061065970610847-
GWHAAZE00000002CDS7060971370609772-
GWHAAZE00000002three_prime_UTR7060936070609712-
Transcript Sequence

Network for GWHGAAZE008347

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase1234101.40E-17
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCK1_CK1-Pl

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf50.405
SRR3591706second leaf37.187
SRR3591707mature leaf42.487
SRR3591708Shoot apex47.862
SRR3591709Stem50.624
SRR3591710White floral bud54.696
SRR3591711White flower78.033
SRR3591712Green floral bud48.883
SRR3591713Yellow flower76.906
SRP173429 SRR8316895Juvenile bud stage 20.998
SRR8316896Juvenile bud stage 32.246
SRR8316897Juvenile bud stage 1.889
SRR8316894Third green stage 13.950
SRR8316900Third green stage 37.317
SRR8316901Third green stage 36.952
SRR8316898Complete white stage 17.947
SRR8316899Complete white stage 54.168
SRR8316903Complete white stage 34.694
SRR8316902Silver flowering stage23.648
SRR8316904Silver flowering stage33.047
SRR8316905Silver flowering stage16.788
SRR8316906Gold flowering stage 59.211
SRR8316907Gold flowering stage 51.352
SRR8316908Gold flowering stage 32.676
SRP132670SRR6706286Control36.918
SRR6706287Light intensity 50%36.681
SRR6706288Light intensity 20%35.815
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.112
CNS0095593Slightly white alabastrum(diploid) 225.431
CNS0095594Slightly white alabastrum(diploid) 320.174
CNS0095595Whole white alabastrum(diploid) 222.197
CNS0095596Whole white alabastrum(diploid) 318.772
CNS0095597Whole white alabastrum(diploid) 419.366
CNS0095598Silvery flower (diploied) 133.657
CNS0095599Silvery flower (diploied) 231.438
CNS0095600Silvery flower (diploied) 342.587
CNS0095601Golden flower (diploid) 129.854
CNS0095602Golden flower (diploid) 247.872
CNS0095603Golden flower (diploid) 345.907
CNS0095604Slightly white alabastrum(tetraploid) 16.500
CNS0095605Slightly white alabastrum(tetraploid) 25.014
CNS0095606Slightly white alabastrum(tetraploid) 314.718
CNS0095607Whole white alabastrum(tetraploid) 14.046
CNS0095608Whole white alabastrum(tetraploid) 22.352
CNS0095609Whole white alabastrum(tetraploid) 37.889
CNS0095610Silvery flower (tetraploid) 115.132
CNS0095611Silvery flower (tetraploid) 213.397
CNS0095612Silvery flower (tetraploid) 313.261
CNS0095613Golden flower (tetraploid) 111.177
CNS0095614Golden flower (tetraploid) 215.189
CNS0095615Golden flower (tetraploid) 314.461
CRA001975CRR073297Stem 131.158
CRR073298Stem 231.585
CRR073299Stem 329.064
CRR073300Leaf 135.984
CRR073301Leaf 228.794
CRR073302Leaf 328.550
CRR073303Juvenile bud 125.166
CRR073304Juvenile bud 226.513
CRR073305Juvenile bud 333.934
CRR073306Third green 127.043
CRR073307Third green 224.840
CRR073308Third green 330.078
CRR073309Second white 124.481
CRR073310Second white 226.892
CRR073311Second white 328.697
CRR073312Silver flowering 130.355
CRR073313Silver flowering 226.991
CRR073314Silver flowering 321.741
CRR073315Gold flowering 122.130
CRR073316Gold flowering 230.742
CRR073317Gold flowering 324.261
CRR073318Tawny withering 126.497
CRR073319Tawny withering 221.352
CRR073320Tawny withering 321.211