Gene detail

Detail information of GWHGAAZE008257

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007206842.1	9.3141E-159	hypothetical protein PRUPE_ppa027053mg [Prunus persica]
Swissprot	tr\|Q9LEH3\|PER15_IPOBA	4E-148	Peroxidase 15 {ECO:0000303\|PubMed:17936696} (Precursor)
trEMBL	tr\|M5W3Y0\|M5W3Y0_PRUPE	3E-159	Uncharacterized protein {ECO:0000313\|EMBL:EMJ08041.1}
TAIR10	AT5G06720.1	8E-108	peroxidase 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	67506001	67508727	-
GWHAAZE00000002	mRNA	67506001	67508727	-
GWHAAZE00000002	exon	67506001	67506482	-
GWHAAZE00000002	exon	67506773	67506938	-
GWHAAZE00000002	exon	67507406	67507594	-
GWHAAZE00000002	exon	67508512	67508727	-
GWHAAZE00000002	CDS	67508512	67508727	-
GWHAAZE00000002	CDS	67507406	67507594	-
GWHAAZE00000002	CDS	67506773	67506938	-
GWHAAZE00000002	CDS	67506001	67506482	-

Transcript Sequence
>GWHTAAZE008265 ATGTCTACTTCATCAAGACTAGTTGTCTTGTTCGTGAGTGTAATATTGTTAGTGTTGGGAGGAAGAAGTAAGGCTCAACTTAGCTCCACCTTCTACGACACGACGTGCCCAGACGTGACCAGCGTGGTGCGGAGCGTGTTGACACAGGCGCAACGGAACGATAACGGAGTTGCTGCCAGACTCATTCGCCTTCATTTCCATGATTGCTTCGTCAATGGTTGCGATGCATCAATACTGCTGGACAACGCGCCGGGAATAGCGAGTGAGAAAGACGCAGTTCCAAATACTTCAATAGCTGGAACCGAGGTGGTTGATGACATCAAAACGGCACTCGAGAATGTTTGCCCTGGTGTCGTTTCGTGTGCTGATATATTGGCGATCGCTTCCGAAATTTCTGTTGTTCTGACAGGGGGTCCAACATGGAATGTAGTATTGGGAAGAAGAGACAGCAGGACAGCAAACATAGCTGGTGCAGGAAGTAGCATCCCAAGCCCTTTCAGAGGCCTTGCTGACATTCAAAACAAGTTCACTGCTGTTGGTCTTGACAACACTGATCTTGTTGCTTTATCTGTAAGAATTCATGTTTGCATTTCTTGGGCATTGGGTGGTTGTACCGTAATGCGCATTCGAATCACTTCTTCAGGTGCTCATACATTCGGAAGGGCAAGATGTGTATCTTTCCGCGACCGGCTTTACAATTTCAGCAACACTGGAAATCCAGACCCGACTCTAGACACAACATACTTGGCAACGCTTCGCCAGTCATGCCCAAACGGTGGCAATGCAAACACTTTGGTCAATCTTGATCCCACTACTCCCAATGGCTTCGACAACAGTTACTTCACCAACCTCCAAAACAATCGCGGCCTTCTCCAGAGTGATCAAGAGCTCTTGTCGACTAGCGGAAGCACGGTCGCGATTGTTAATCAATTTGGTAACAGCCAAAGCGCTTTCTTCACTAGTTTTGCACAGTCCATGATTAATATGGGAAATATAAGTCCCTTAACAGGAACAAATGGGGAGATTAGGTCTGATTGTAGGAGGGTTAATTAA

Network for GWHGAAZE008257

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00141.24	peroxidase	43	313	5.10E-72

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00430	E1.11.1.7	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Phenylpropanoid biosynthesis	map00940

Gene Ontology

GO term	Ontology	Name
GO:0006979	biological_process	response to oxidative stress
GO:0055114	biological_process	oxidation-reduction process
GO:0042744	biological_process	hydrogen peroxide catabolic process
GO:0004601	molecular_function	peroxidase activity
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.394
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.361
	SRR3591710	White floral bud	0.234
	SRR3591711	White flower	0.071
	SRR3591712	Green floral bud	0.247
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.503
	SRR8316896	Juvenile bud stage	0.486
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.050
	SRR8316900	Third green stage	0.032
	SRR8316901	Third green stage	0.408
	SRR8316898	Complete white stage	0.087
	SRR8316899	Complete white stage	0.313
	SRR8316903	Complete white stage	0.193
	SRR8316902	Silver flowering stage	0.143
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.051
	SRR8316906	Gold flowering stage	0.153
	SRR8316907	Gold flowering stage	0.261
	SRR8316908	Gold flowering stage	0.484
SRP132670	SRR6706286	Control	0.657
	SRR6706287	Light intensity 50%	0.536
	SRR6706288	Light intensity 20%	1.163
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.083
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	1.465
	CNS0095595	Whole white alabastrum(diploid) 2	0.080
	CNS0095596	Whole white alabastrum(diploid) 3	0.392
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.274
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.058
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.143
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.040
	CNS0095610	Silvery flower (tetraploid) 1	0.040
	CNS0095611	Silvery flower (tetraploid) 2	0.073
	CNS0095612	Silvery flower (tetraploid) 3	0.006
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.078
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.336
	CRR073298	Stem 2	0.086
	CRR073299	Stem 3	0.204
	CRR073300	Leaf 1	0.133
	CRR073301	Leaf 2	0.311
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.041
	CRR073304	Juvenile bud 2	0.234
	CRR073305	Juvenile bud 3	0.364
	CRR073306	Third green 1	2.818
	CRR073307	Third green 2	0.543
	CRR073308	Third green 3	0.008
	CRR073309	Second white 1	0.154
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.019
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	40.379
	CRR073316	Gold flowering 2	47.381
	CRR073317	Gold flowering 3	34.986
	CRR073318	Tawny withering 1	37.926
	CRR073319	Tawny withering 2	57.747
	CRR073320	Tawny withering 3	4.972