Detail information of GWHGAAZE008218


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002266954.11.6293E-160PREDICTED: pseudouridine-metabolizing bifunctional protein C1861.05 [Vitis vinifera]
trEMBLtr|D7T1C1|D7T1C1_VITVI6E-161Putative uncharacterized protein {ECO:0000313|EMBL:CBI24301.3}
TAIR10AT1G50510.19E-107indigoidine synthase A family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene6549399065501821-
GWHAAZE00000002mRNA6549399065501821-
GWHAAZE00000002exon6549399065494009-
GWHAAZE00000002exon6549429665494392-
GWHAAZE00000002exon6549480965494857-
GWHAAZE00000002exon6549515465495274-
GWHAAZE00000002exon6549588765495962-
GWHAAZE00000002exon6549605865496164-
GWHAAZE00000002exon6549664165496701-
GWHAAZE00000002exon6549683165496890-
GWHAAZE00000002exon6549843265498514-
GWHAAZE00000002exon6550043665500546-
GWHAAZE00000002exon6550156965501677-
GWHAAZE00000002exon6550181965501821-
GWHAAZE00000002CDS6550181965501821-
GWHAAZE00000002CDS6550156965501677-
GWHAAZE00000002CDS6550043665500546-
GWHAAZE00000002CDS6549843265498514-
GWHAAZE00000002CDS6549683165496890-
GWHAAZE00000002CDS6549664165496701-
GWHAAZE00000002CDS6549605865496164-
GWHAAZE00000002CDS6549588765495962-
GWHAAZE00000002CDS6549515465495274-
GWHAAZE00000002CDS6549480965494857-
GWHAAZE00000002CDS6549429665494392-
GWHAAZE00000002CDS6549399065494009-
Transcript Sequence

Network for GWHGAAZE008218

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04227.13Indigoidine_A162801.40E-102
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K16329psuG Metabolic pathways map01100
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0016798molecular_functionhydrolase activity, acting on glycosyl bonds

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.198
SRR3591706second leaf11.466
SRR3591707mature leaf5.721
SRR3591708Shoot apex15.265
SRR3591709Stem8.517
SRR3591710White floral bud7.786
SRR3591711White flower9.172
SRR3591712Green floral bud9.309
SRR3591713Yellow flower6.897
SRP173429 SRR8316895Juvenile bud stage 6.788
SRR8316896Juvenile bud stage 6.651
SRR8316897Juvenile bud stage 4.709
SRR8316894Third green stage 3.302
SRR8316900Third green stage 6.879
SRR8316901Third green stage 8.201
SRR8316898Complete white stage 4.261
SRR8316899Complete white stage 8.283
SRR8316903Complete white stage 5.289
SRR8316902Silver flowering stage3.219
SRR8316904Silver flowering stage3.276
SRR8316905Silver flowering stage1.235
SRR8316906Gold flowering stage 6.532
SRR8316907Gold flowering stage 8.137
SRR8316908Gold flowering stage 7.588
SRP132670SRR6706286Control6.018
SRR6706287Light intensity 50%6.649
SRR6706288Light intensity 20%7.826
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.962
CNS0095593Slightly white alabastrum(diploid) 24.440
CNS0095594Slightly white alabastrum(diploid) 33.571
CNS0095595Whole white alabastrum(diploid) 25.833
CNS0095596Whole white alabastrum(diploid) 34.200
CNS0095597Whole white alabastrum(diploid) 42.522
CNS0095598Silvery flower (diploied) 15.559
CNS0095599Silvery flower (diploied) 23.922
CNS0095600Silvery flower (diploied) 34.536
CNS0095601Golden flower (diploid) 15.447
CNS0095602Golden flower (diploid) 23.479
CNS0095603Golden flower (diploid) 34.279
CNS0095604Slightly white alabastrum(tetraploid) 19.429
CNS0095605Slightly white alabastrum(tetraploid) 29.163
CNS0095606Slightly white alabastrum(tetraploid) 315.977
CNS0095607Whole white alabastrum(tetraploid) 13.589
CNS0095608Whole white alabastrum(tetraploid) 23.737
CNS0095609Whole white alabastrum(tetraploid) 311.155
CNS0095610Silvery flower (tetraploid) 17.324
CNS0095611Silvery flower (tetraploid) 27.157
CNS0095612Silvery flower (tetraploid) 310.617
CNS0095613Golden flower (tetraploid) 13.596
CNS0095614Golden flower (tetraploid) 25.856
CNS0095615Golden flower (tetraploid) 33.187
CRA001975CRR073297Stem 18.756
CRR073298Stem 28.705
CRR073299Stem 38.043
CRR073300Leaf 17.944
CRR073301Leaf 28.607
CRR073302Leaf 37.380
CRR073303Juvenile bud 16.775
CRR073304Juvenile bud 24.422
CRR073305Juvenile bud 34.203
CRR073306Third green 14.095
CRR073307Third green 23.144
CRR073308Third green 32.653
CRR073309Second white 14.585
CRR073310Second white 23.923
CRR073311Second white 32.958
CRR073312Silver flowering 12.010
CRR073313Silver flowering 21.608
CRR073314Silver flowering 33.588
CRR073315Gold flowering 17.799
CRR073316Gold flowering 29.356
CRR073317Gold flowering 34.455
CRR073318Tawny withering 13.671
CRR073319Tawny withering 25.646
CRR073320Tawny withering 37.304