Detail information of GWHGAAZE008148


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002279784.20PREDICTED: peroxisome biogenesis factor 10 [Vitis vinifera]
Swissprottr|Q9SYU4|PEX10_ARATH1E-160Peroxisome biogenesis factor 10
trEMBLtr|D7STW0|D7STW0_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI20709.3}
TAIR10AT2G26350.16E-128peroxin 10

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene6269977062716845-
GWHAAZE00000002mRNA6269977062716845-
GWHAAZE00000002exon6271662562716845-
GWHAAZE00000002exon6271650462716528-
GWHAAZE00000002exon6271520562715294-
GWHAAZE00000002exon6271432162714415-
GWHAAZE00000002exon6271398562714195-
GWHAAZE00000002exon6271183862711907-
GWHAAZE00000002exon6270925162709351-
GWHAAZE00000002exon6270371462703813-
GWHAAZE00000002exon6270268062702774-
GWHAAZE00000002exon6270009862700186-
GWHAAZE00000002exon6269977062699872-
GWHAAZE00000002CDS6271662562716845-
GWHAAZE00000002CDS6271650462716528-
GWHAAZE00000002CDS6271520562715294-
GWHAAZE00000002CDS6271432162714415-
GWHAAZE00000002CDS6271398562714195-
GWHAAZE00000002CDS6271183862711907-
GWHAAZE00000002CDS6270925162709351-
GWHAAZE00000002CDS6270371462703813-
GWHAAZE00000002CDS6270268062702774-
GWHAAZE00000002CDS6270009862700186-
GWHAAZE00000002CDS6269977062699872-
Transcript Sequence

Network for GWHGAAZE008148

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04757.15Pex2_Pex12482365.40E-27
PF13920.7zf-C3HC4_33443881.10E-09
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
K13346PEX10 Peroxisome map04146

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.871
SRR3591706second leaf13.253
SRR3591707mature leaf15.805
SRR3591708Shoot apex22.171
SRR3591709Stem27.987
SRR3591710White floral bud32.155
SRR3591711White flower30.301
SRR3591712Green floral bud34.667
SRR3591713Yellow flower26.834
SRP173429 SRR8316895Juvenile bud stage 11.441
SRR8316896Juvenile bud stage 15.180
SRR8316897Juvenile bud stage 5.997
SRR8316894Third green stage 6.127
SRR8316900Third green stage 19.839
SRR8316901Third green stage 18.528
SRR8316898Complete white stage 8.953
SRR8316899Complete white stage 28.883
SRR8316903Complete white stage 11.944
SRR8316902Silver flowering stage7.774
SRR8316904Silver flowering stage9.631
SRR8316905Silver flowering stage4.553
SRR8316906Gold flowering stage 18.934
SRR8316907Gold flowering stage 18.104
SRR8316908Gold flowering stage 11.974
SRP132670SRR6706286Control21.408
SRR6706287Light intensity 50%21.458
SRR6706288Light intensity 20%22.858
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.188
CNS0095593Slightly white alabastrum(diploid) 215.456
CNS0095594Slightly white alabastrum(diploid) 315.415
CNS0095595Whole white alabastrum(diploid) 215.225
CNS0095596Whole white alabastrum(diploid) 315.095
CNS0095597Whole white alabastrum(diploid) 415.954
CNS0095598Silvery flower (diploied) 118.264
CNS0095599Silvery flower (diploied) 216.177
CNS0095600Silvery flower (diploied) 318.906
CNS0095601Golden flower (diploid) 115.088
CNS0095602Golden flower (diploid) 220.669
CNS0095603Golden flower (diploid) 319.980
CNS0095604Slightly white alabastrum(tetraploid) 117.394
CNS0095605Slightly white alabastrum(tetraploid) 214.256
CNS0095606Slightly white alabastrum(tetraploid) 321.079
CNS0095607Whole white alabastrum(tetraploid) 117.980
CNS0095608Whole white alabastrum(tetraploid) 213.627
CNS0095609Whole white alabastrum(tetraploid) 319.847
CNS0095610Silvery flower (tetraploid) 115.390
CNS0095611Silvery flower (tetraploid) 222.450
CNS0095612Silvery flower (tetraploid) 319.915
CNS0095613Golden flower (tetraploid) 112.333
CNS0095614Golden flower (tetraploid) 216.753
CNS0095615Golden flower (tetraploid) 314.424
CRA001975CRR073297Stem 124.331
CRR073298Stem 222.055
CRR073299Stem 322.402
CRR073300Leaf 128.236
CRR073301Leaf 226.579
CRR073302Leaf 319.855
CRR073303Juvenile bud 125.278
CRR073304Juvenile bud 216.838
CRR073305Juvenile bud 326.231
CRR073306Third green 111.496
CRR073307Third green 212.353
CRR073308Third green 313.068
CRR073309Second white 19.283
CRR073310Second white 212.895
CRR073311Second white 39.930
CRR073312Silver flowering 18.634
CRR073313Silver flowering 210.879
CRR073314Silver flowering 39.065
CRR073315Gold flowering 110.010
CRR073316Gold flowering 212.569
CRR073317Gold flowering 37.200
CRR073318Tawny withering 121.736
CRR073319Tawny withering 221.415
CRR073320Tawny withering 316.454