Detail information of GWHGAAZE007865


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011102266.15.62577E-80PREDICTED: signal peptidase complex catalytic subunit SEC11A-like, partial [Sesamum indicum]
trEMBLtr|A0A059BTM7|A0A059BTM7_EUCGR2E-79Uncharacterized protein {ECO:0000313|EMBL:KCW68970.1}
TAIR10AT1G52600.14E-61Peptidase S24/S26A/S26B/S26C family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene5470462854709527+
GWHAAZE00000002mRNA5470462854709527+
GWHAAZE00000002exon5470462854704738+
GWHAAZE00000002exon5470575954705830+
GWHAAZE00000002exon5470674954706784+
GWHAAZE00000002exon5470885554708900+
GWHAAZE00000002exon5470943654709527+
GWHAAZE00000002CDS5470462854704738+
GWHAAZE00000002CDS5470575954705830+
GWHAAZE00000002CDS5470674954706784+
GWHAAZE00000002CDS5470885554708900+
GWHAAZE00000002CDS5470943654709527+
Transcript Sequence

Network for GWHGAAZE007865

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00717.24Peptidase_S24101173.30E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13280SEC11, sipW Protein export map03060

Gene Ontology

GO term OntologyName
GO:0006465biological_processsignal peptide processing
GO:0016020cellular_componentmembrane
GO:0008233molecular_functionpeptidase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf153.785
SRR3591706second leaf68.106
SRR3591707mature leaf56.990
SRR3591708Shoot apex122.521
SRR3591709Stem108.997
SRR3591710White floral bud138.823
SRR3591711White flower131.614
SRR3591712Green floral bud146.492
SRR3591713Yellow flower111.979
SRP173429 SRR8316895Juvenile bud stage 88.084
SRR8316896Juvenile bud stage 104.699
SRR8316897Juvenile bud stage 68.817
SRR8316894Third green stage 48.949
SRR8316900Third green stage 151.235
SRR8316901Third green stage 136.088
SRR8316898Complete white stage 72.415
SRR8316899Complete white stage 175.887
SRR8316903Complete white stage 98.264
SRR8316902Silver flowering stage80.656
SRR8316904Silver flowering stage87.122
SRR8316905Silver flowering stage44.497
SRR8316906Gold flowering stage 156.505
SRR8316907Gold flowering stage 146.735
SRR8316908Gold flowering stage 203.490
SRP132670SRR6706286Control82.092
SRR6706287Light intensity 50%84.938
SRR6706288Light intensity 20%98.577
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1115.860
CNS0095593Slightly white alabastrum(diploid) 2124.892
CNS0095594Slightly white alabastrum(diploid) 3123.735
CNS0095595Whole white alabastrum(diploid) 2130.535
CNS0095596Whole white alabastrum(diploid) 3122.763
CNS0095597Whole white alabastrum(diploid) 4110.164
CNS0095598Silvery flower (diploied) 190.223
CNS0095599Silvery flower (diploied) 298.998
CNS0095600Silvery flower (diploied) 3110.203
CNS0095601Golden flower (diploid) 188.547
CNS0095602Golden flower (diploid) 299.280
CNS0095603Golden flower (diploid) 391.309
CNS0095604Slightly white alabastrum(tetraploid) 1131.049
CNS0095605Slightly white alabastrum(tetraploid) 2131.630
CNS0095606Slightly white alabastrum(tetraploid) 3179.294
CNS0095607Whole white alabastrum(tetraploid) 1101.263
CNS0095608Whole white alabastrum(tetraploid) 2103.681
CNS0095609Whole white alabastrum(tetraploid) 3132.119
CNS0095610Silvery flower (tetraploid) 1150.619
CNS0095611Silvery flower (tetraploid) 2123.109
CNS0095612Silvery flower (tetraploid) 3132.663
CNS0095613Golden flower (tetraploid) 1110.105
CNS0095614Golden flower (tetraploid) 2123.679
CNS0095615Golden flower (tetraploid) 387.542
CRA001975CRR073297Stem 179.510
CRR073298Stem 275.577
CRR073299Stem 377.964
CRR073300Leaf 193.717
CRR073301Leaf 281.668
CRR073302Leaf 399.905
CRR073303Juvenile bud 1115.383
CRR073304Juvenile bud 2105.313
CRR073305Juvenile bud 383.764
CRR073306Third green 160.567
CRR073307Third green 259.785
CRR073308Third green 363.859
CRR073309Second white 1101.095
CRR073310Second white 265.563
CRR073311Second white 348.090
CRR073312Silver flowering 150.370
CRR073313Silver flowering 255.173
CRR073314Silver flowering 343.145
CRR073315Gold flowering 156.331
CRR073316Gold flowering 259.245
CRR073317Gold flowering 350.726
CRR073318Tawny withering 187.023
CRR073319Tawny withering 2102.712
CRR073320Tawny withering 387.663