Detail information of GWHGAAZE007738


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010648943.11.52593E-59PREDICTED: transcription repressor KAN1 isoform X3 [Vitis vinifera]
Swissprottr|Q93WJ9|KAN1_ARATH2E-44Transcription repressor KAN1
trEMBLtr|A5AFB9|A5AFB9_VITVI2E-59Putative uncharacterized protein {ECO:0000313|EMBL:CAN77882.1}
TAIR10AT5G16560.19E-38Homeodomain-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene5142679351428034-
GWHAAZE00000002mRNA5142679351428034-
GWHAAZE00000002exon5142679351426941-
GWHAAZE00000002exon5142741351428034-
GWHAAZE00000002CDS5142741351428034-
GWHAAZE00000002CDS5142679351426941-
Transcript Sequence

Network for GWHGAAZE007738

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGARP-G2-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.170
SRR3591706second leaf2.755
SRR3591707mature leaf4.320
SRR3591708Shoot apex4.318
SRR3591709Stem7.646
SRR3591710White floral bud5.587
SRR3591711White flower6.098
SRR3591712Green floral bud4.652
SRR3591713Yellow flower2.002
SRP173429 SRR8316895Juvenile bud stage 2.704
SRR8316896Juvenile bud stage 1.807
SRR8316897Juvenile bud stage 0.695
SRR8316894Third green stage 1.647
SRR8316900Third green stage 2.661
SRR8316901Third green stage 2.301
SRR8316898Complete white stage 0.440
SRR8316899Complete white stage 2.820
SRR8316903Complete white stage 1.573
SRR8316902Silver flowering stage0.399
SRR8316904Silver flowering stage0.389
SRR8316905Silver flowering stage0.304
SRR8316906Gold flowering stage 0.483
SRR8316907Gold flowering stage 0.903
SRR8316908Gold flowering stage 1.379
SRP132670SRR6706286Control3.410
SRR6706287Light intensity 50%3.458
SRR6706288Light intensity 20%4.066
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.253
CNS0095593Slightly white alabastrum(diploid) 21.610
CNS0095594Slightly white alabastrum(diploid) 31.549
CNS0095595Whole white alabastrum(diploid) 22.771
CNS0095596Whole white alabastrum(diploid) 30.313
CNS0095597Whole white alabastrum(diploid) 41.207
CNS0095598Silvery flower (diploied) 17.226
CNS0095599Silvery flower (diploied) 26.249
CNS0095600Silvery flower (diploied) 34.680
CNS0095601Golden flower (diploid) 14.812
CNS0095602Golden flower (diploid) 24.346
CNS0095603Golden flower (diploid) 33.502
CNS0095604Slightly white alabastrum(tetraploid) 12.348
CNS0095605Slightly white alabastrum(tetraploid) 22.674
CNS0095606Slightly white alabastrum(tetraploid) 33.626
CNS0095607Whole white alabastrum(tetraploid) 12.663
CNS0095608Whole white alabastrum(tetraploid) 20.301
CNS0095609Whole white alabastrum(tetraploid) 30.658
CNS0095610Silvery flower (tetraploid) 11.241
CNS0095611Silvery flower (tetraploid) 22.142
CNS0095612Silvery flower (tetraploid) 32.111
CNS0095613Golden flower (tetraploid) 10.531
CNS0095614Golden flower (tetraploid) 20.131
CNS0095615Golden flower (tetraploid) 31.073
CRA001975CRR073297Stem 16.289
CRR073298Stem 25.371
CRR073299Stem 32.816
CRR073300Leaf 16.009
CRR073301Leaf 27.255
CRR073302Leaf 33.343
CRR073303Juvenile bud 12.963
CRR073304Juvenile bud 23.252
CRR073305Juvenile bud 33.707
CRR073306Third green 11.821
CRR073307Third green 21.641
CRR073308Third green 31.648
CRR073309Second white 12.014
CRR073310Second white 22.007
CRR073311Second white 33.677
CRR073312Silver flowering 12.861
CRR073313Silver flowering 22.748
CRR073314Silver flowering 30.693
CRR073315Gold flowering 12.826
CRR073316Gold flowering 23.173
CRR073317Gold flowering 33.447
CRR073318Tawny withering 114.283
CRR073319Tawny withering 212.518
CRR073320Tawny withering 313.322