Gene detail

Detail information of GWHGAAZE007728

Functional Annotation

Database	Orthologs	Annotation
Nr	AII73556.1	UGP-glucose pyrophosphorylase [Actinidia eriantha]
Swissprot	tr\|Q9SDX3\|UGPA_MUSAC	UTP--glucose-1-phosphate uridylyltransferase
trEMBL	tr\|A0A076JE12\|A0A076JE12_ACTER	UGP-glucose pyrophosphorylase {ECO:0000313\|EMBL:AII73556.1}
TAIR10	AT5G17310.2	UDP-glucose pyrophosphorylase 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000002	gene	51250845	51259353	+
GWHAAZE00000002	mRNA	51250845	51259353	+
GWHAAZE00000002	exon	51250845	51250931	+
GWHAAZE00000002	exon	51251086	51251129	+
GWHAAZE00000002	exon	51251343	51251434	+
GWHAAZE00000002	exon	51252165	51252255	+
GWHAAZE00000002	exon	51253454	51253514	+
GWHAAZE00000002	exon	51253623	51253700	+
GWHAAZE00000002	exon	51253795	51253845	+
GWHAAZE00000002	exon	51253981	51254054	+
GWHAAZE00000002	exon	51254373	51254445	+
GWHAAZE00000002	exon	51254544	51254615	+
GWHAAZE00000002	exon	51255032	51255097	+
GWHAAZE00000002	exon	51255611	51255643	+
GWHAAZE00000002	exon	51256530	51256582	+
GWHAAZE00000002	exon	51256658	51256733	+
GWHAAZE00000002	exon	51256830	51256886	+
GWHAAZE00000002	exon	51257137	51257220	+
GWHAAZE00000002	exon	51258100	51258198	+
GWHAAZE00000002	exon	51258286	51258390	+
GWHAAZE00000002	exon	51259264	51259353	+
GWHAAZE00000002	CDS	51250845	51250931	+
GWHAAZE00000002	CDS	51251086	51251129	+
GWHAAZE00000002	CDS	51251343	51251434	+
GWHAAZE00000002	CDS	51252165	51252255	+
GWHAAZE00000002	CDS	51253454	51253514	+
GWHAAZE00000002	CDS	51253623	51253700	+
GWHAAZE00000002	CDS	51253795	51253845	+
GWHAAZE00000002	CDS	51253981	51254054	+
GWHAAZE00000002	CDS	51254373	51254445	+
GWHAAZE00000002	CDS	51254544	51254615	+
GWHAAZE00000002	CDS	51255032	51255097	+
GWHAAZE00000002	CDS	51255611	51255643	+
GWHAAZE00000002	CDS	51256530	51256582	+
GWHAAZE00000002	CDS	51256658	51256733	+
GWHAAZE00000002	CDS	51256830	51256886	+
GWHAAZE00000002	CDS	51257137	51257220	+
GWHAAZE00000002	CDS	51258100	51258198	+
GWHAAZE00000002	CDS	51258286	51258390	+
GWHAAZE00000002	CDS	51259264	51259353	+

Transcript Sequence
>GWHTAAZE007736 ATGGCTACTGCTACTGTTATCCCTACAGAGACCGAGAAGATCACTAAACTCACCTCTGCTGTTGCTGGCCTCAATCAGATCAGGCAGAATGAGAAATCTGGATTTATCAACCTCGTTTCACGGTATCTCAGTGGCGACGCACAACACATTGAGTGGAGTAAGATCCAGACTCCTACTGATGAGGTGGTTGTGCCTTACGATAGCTTAGCACCCGTGCCTGAAGATTCTACGGAAACAAAAAAGCTTTTGGACAAACTTGTGGTTTTAAAGCTTAATGGTGGTTTGGGCACAACAATGGGTTGCACTGGTCCAAAGTCAGTCATAGAAGTTCGGAATGGTTTAACTTTCCTAGACTTAATTGTGATCCAAATTGAGACACTAAATTCTAAATATGGATGCAATGTGCCCCTACTTCTAATGAACTCATTCAACACGCATGAAGATACACAGAAGATTGTAGAGAAATATGCCAATTCCCAGATTGAGATTCATACCTTTAATCAGAGCCAGTACCCGCGTTTGGTTATTGAAGACTTCTTGCCACTGCCATGCAAAGGAAATGATGGCAAGGATGGATGGTACCCCCCTGGCCATGGTGATGTGTTCACATCCTTGATGAATAGTGGCAAGCTTGCCGCATTACTGTCACAGGGCAAGGAGTATGTCTTCATTGCCAATTCTGATAACTTGGGAGCTGTTGTTGATTTAAGTATCCTTAATATGGTAACACCCAAAACGTTGGCTGATGTGAAAGGTGGTACTCTAATTTCTTATGAAGGAAAAGTTCAGCTCTTGGAAATTGCACAAGTTCCTGACGAACATGTCAATGAATTCAAATCGATAGAGAAGTTCAAGATATTCAACACCAATAACTTGTGGGTGAACTTGAAGGCAATTAAGAGACTTGTAGAAGCTGACGCACTCAAGATGGAGATTATTCCAAACCCCAAGGAAGTGGATGGGGTTAAGGTTCTCCAGCTGGAAACAGCAGCTGGTGCTGCAATTAGGTTCTTTGATGATGCCATTGGAATCAACGTTCCTCGATCTCGATTCCTTCCTGTAAAAGCCACTTCAGATTTGCTTCTTGTCCAGTCTGATCTTTACACCTTAGCTGATGGCTTTGTGACAAGAAACAAAGCTAGGGCAAATCCTGAAAACCCTTCCATCGAATTGGGACCTGAATTTAAGAAGGTGGGAAACTTTTTGAGCCGCTTCAAGTCTATCCCTAGTATTATTGAGCTTGATAGCTTGAAGGTGACTGGTGATGTATGGTTTGGAGCTAATGTCACTCTTAAGGGAAAAGTGGTTATTGCTGCGAAACCTGGGGTTAAGTTGGAAATCCCTGATGGATGTGTACTTGTAGACAAGGTAATTCACTGCAACTAG

Network for GWHGAAZE007728

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01704.19	UDPGP	34	432	5.00E-170

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00963	UGP2, galU, galF	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Pentose and glucuronate interconversions	map00040
		Galactose metabolism	map00052
		Starch and sucrose metabolism	map00500
		Amino sugar and nucleotide sugar metabolism	map00520

Gene Ontology

GO term	Ontology	Name
GO:0006011	biological_process	UDP-glucose metabolic process
GO:0003983	molecular_function	UTP:glucose-1-phosphate uridylyltransferase activity
GO:0070569	molecular_function	uridylyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	315.239
	SRR3591706	second leaf	209.195
	SRR3591707	mature leaf	188.700
	SRR3591708	Shoot apex	132.764
	SRR3591709	Stem	250.722
	SRR3591710	White floral bud	91.144
	SRR3591711	White flower	100.445
	SRR3591712	Green floral bud	100.146
	SRR3591713	Yellow flower	82.679
SRP173429	SRR8316895	Juvenile bud stage	76.583
	SRR8316896	Juvenile bud stage	103.580
	SRR8316897	Juvenile bud stage	63.666
	SRR8316894	Third green stage	66.842
	SRR8316900	Third green stage	173.969
	SRR8316901	Third green stage	144.192
	SRR8316898	Complete white stage	100.888
	SRR8316899	Complete white stage	154.589
	SRR8316903	Complete white stage	134.092
	SRR8316902	Silver flowering stage	79.975
	SRR8316904	Silver flowering stage	123.174
	SRR8316905	Silver flowering stage	57.606
	SRR8316906	Gold flowering stage	118.198
	SRR8316907	Gold flowering stage	134.788
	SRR8316908	Gold flowering stage	116.616
SRP132670	SRR6706286	Control	110.587
	SRR6706287	Light intensity 50%	122.324
	SRR6706288	Light intensity 20%	139.614
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	76.884
	CNS0095593	Slightly white alabastrum(diploid) 2	92.128
	CNS0095594	Slightly white alabastrum(diploid) 3	82.314
	CNS0095595	Whole white alabastrum(diploid) 2	74.839
	CNS0095596	Whole white alabastrum(diploid) 3	82.443
	CNS0095597	Whole white alabastrum(diploid) 4	81.824
	CNS0095598	Silvery flower (diploied) 1	83.638
	CNS0095599	Silvery flower (diploied) 2	93.355
	CNS0095600	Silvery flower (diploied) 3	146.117
	CNS0095601	Golden flower (diploid) 1	68.971
	CNS0095602	Golden flower (diploid) 2	111.441
	CNS0095603	Golden flower (diploid) 3	105.413
	CNS0095604	Slightly white alabastrum(tetraploid) 1	92.818
	CNS0095605	Slightly white alabastrum(tetraploid) 2	87.435
	CNS0095606	Slightly white alabastrum(tetraploid) 3	148.478
	CNS0095607	Whole white alabastrum(tetraploid) 1	60.917
	CNS0095608	Whole white alabastrum(tetraploid) 2	54.025
	CNS0095609	Whole white alabastrum(tetraploid) 3	117.570
	CNS0095610	Silvery flower (tetraploid) 1	139.848
	CNS0095611	Silvery flower (tetraploid) 2	123.934
	CNS0095612	Silvery flower (tetraploid) 3	90.478
	CNS0095613	Golden flower (tetraploid) 1	59.597
	CNS0095614	Golden flower (tetraploid) 2	103.046
	CNS0095615	Golden flower (tetraploid) 3	71.530
CRA001975	CRR073297	Stem 1	103.870
	CRR073298	Stem 2	92.356
	CRR073299	Stem 3	105.522
	CRR073300	Leaf 1	126.903
	CRR073301	Leaf 2	127.823
	CRR073302	Leaf 3	130.047
	CRR073303	Juvenile bud 1	166.974
	CRR073304	Juvenile bud 2	166.921
	CRR073305	Juvenile bud 3	161.125
	CRR073306	Third green 1	70.558
	CRR073307	Third green 2	61.519
	CRR073308	Third green 3	61.084
	CRR073309	Second white 1	64.652
	CRR073310	Second white 2	59.069
	CRR073311	Second white 3	50.052
	CRR073312	Silver flowering 1	38.139
	CRR073313	Silver flowering 2	41.817
	CRR073314	Silver flowering 3	41.778
	CRR073315	Gold flowering 1	122.046
	CRR073316	Gold flowering 2	161.420
	CRR073317	Gold flowering 3	86.357
	CRR073318	Tawny withering 1	148.664
	CRR073319	Tawny withering 2	132.067
	CRR073320	Tawny withering 3	178.375