Detail information of GWHGAAZE007702


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007202146.13.176E-171hypothetical protein PRUPE_ppa007040mg [Prunus persica]
Swissprottr|Q39242|TRXB2_ARATH5E-164Thioredoxin reductase 2
trEMBLtr|M5W964|M5W964_PRUPE1E-171Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}
TAIR10AT2G17420.14E-121NADPH-dependent thioredoxin reductase A

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene5061449850624637-
GWHAAZE00000002mRNA5061449850624637-
GWHAAZE00000002exon5061449850614596-
GWHAAZE00000002exon5061817350618253-
GWHAAZE00000002exon5062079750620891-
GWHAAZE00000002exon5062262450622788-
GWHAAZE00000002exon5062287750623191-
GWHAAZE00000002exon5062403050624637-
GWHAAZE00000002five_prime_UTR5062453250624637-
GWHAAZE00000002CDS5062403050624531-
GWHAAZE00000002CDS5062287750623191-
GWHAAZE00000002CDS5062262450622788-
GWHAAZE00000002CDS5062079750620891-
GWHAAZE00000002CDS5061817350618253-
GWHAAZE00000002CDS5061449850614596-
Transcript Sequence

Network for GWHGAAZE007702

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07992.15Pyr_redox_2572736.00E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00384trxB, TRR Selenocompound metabolism map00450

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf71.267
SRR3591706second leaf37.278
SRR3591707mature leaf28.683
SRR3591708Shoot apex66.409
SRR3591709Stem57.057
SRR3591710White floral bud76.903
SRR3591711White flower98.035
SRR3591712Green floral bud92.264
SRR3591713Yellow flower92.984
SRP173429 SRR8316895Juvenile bud stage 45.652
SRR8316896Juvenile bud stage 73.920
SRR8316897Juvenile bud stage 30.457
SRR8316894Third green stage 26.610
SRR8316900Third green stage 87.743
SRR8316901Third green stage 95.801
SRR8316898Complete white stage 41.974
SRR8316899Complete white stage 102.927
SRR8316903Complete white stage 55.985
SRR8316902Silver flowering stage42.031
SRR8316904Silver flowering stage44.046
SRR8316905Silver flowering stage26.580
SRR8316906Gold flowering stage 80.030
SRR8316907Gold flowering stage 85.004
SRR8316908Gold flowering stage 93.163
SRP132670SRR6706286Control112.372
SRR6706287Light intensity 50%109.919
SRR6706288Light intensity 20%112.458
CNP0000432CNS0095592Slightly white alabastrum(diploid) 181.119
CNS0095593Slightly white alabastrum(diploid) 287.723
CNS0095594Slightly white alabastrum(diploid) 381.806
CNS0095595Whole white alabastrum(diploid) 278.221
CNS0095596Whole white alabastrum(diploid) 385.685
CNS0095597Whole white alabastrum(diploid) 471.315
CNS0095598Silvery flower (diploied) 156.999
CNS0095599Silvery flower (diploied) 263.577
CNS0095600Silvery flower (diploied) 3106.077
CNS0095601Golden flower (diploid) 164.728
CNS0095602Golden flower (diploid) 294.015
CNS0095603Golden flower (diploid) 395.368
CNS0095604Slightly white alabastrum(tetraploid) 188.389
CNS0095605Slightly white alabastrum(tetraploid) 287.688
CNS0095606Slightly white alabastrum(tetraploid) 3112.421
CNS0095607Whole white alabastrum(tetraploid) 159.249
CNS0095608Whole white alabastrum(tetraploid) 252.887
CNS0095609Whole white alabastrum(tetraploid) 3104.888
CNS0095610Silvery flower (tetraploid) 1112.413
CNS0095611Silvery flower (tetraploid) 297.088
CNS0095612Silvery flower (tetraploid) 376.837
CNS0095613Golden flower (tetraploid) 184.244
CNS0095614Golden flower (tetraploid) 2108.545
CNS0095615Golden flower (tetraploid) 388.063
CRA001975CRR073297Stem 188.748
CRR073298Stem 288.661
CRR073299Stem 3114.770
CRR073300Leaf 1115.847
CRR073301Leaf 2112.359
CRR073302Leaf 3142.720
CRR073303Juvenile bud 1146.788
CRR073304Juvenile bud 2145.379
CRR073305Juvenile bud 3132.934
CRR073306Third green 196.553
CRR073307Third green 290.797
CRR073308Third green 385.084
CRR073309Second white 190.013
CRR073310Second white 275.668
CRR073311Second white 351.074
CRR073312Silver flowering 164.837
CRR073313Silver flowering 286.597
CRR073314Silver flowering 373.034
CRR073315Gold flowering 153.989
CRR073316Gold flowering 256.694
CRR073317Gold flowering 365.610
CRR073318Tawny withering 1101.768
CRR073319Tawny withering 289.813
CRR073320Tawny withering 3101.276