Detail information of GWHGAAZE007682


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010652907.10PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1a [Vitis vinifera]
Swissprottr|Q9C5S2|IRE1A_ARATH0Endoribonuclease (Precursor)
trEMBLtr|F6H4D4|F6H4D4_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB47144.1}
TAIR10AT2G17520.10Endoribonuclease/protein kinase IRE1-like

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene5014479750150084-
GWHAAZE00000002mRNA5014479750150084-
GWHAAZE00000002exon5014479750144943-
GWHAAZE00000002exon5014512950145432-
GWHAAZE00000002exon5014637950146625-
GWHAAZE00000002exon5014757750147631-
GWHAAZE00000002exon5014819350148391-
GWHAAZE00000002exon5014870950150084-
GWHAAZE00000002CDS5014870950150084-
GWHAAZE00000002CDS5014819350148391-
GWHAAZE00000002CDS5014757750147631-
GWHAAZE00000002CDS5014637950146625-
GWHAAZE00000002CDS5014512950145432-
GWHAAZE00000002CDS5014479750144943-
Transcript Sequence

Network for GWHGAAZE007682

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase3236387.00E-31
PF06479.13Ribonuc_2-5A6447695.20E-41
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyIRE1

KEGG pathway

KO Enzyme pathway mapID
K08852ERN1 Protein processing in endoplasmic reticulum map04141
Autophagy - animalmap04140
Apoptosismap04210

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0006397biological_processmRNA processing
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding
GO:0005515molecular_functionprotein binding
GO:0004540molecular_functionribonuclease activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.603
SRR3591706second leaf5.550
SRR3591707mature leaf8.161
SRR3591708Shoot apex9.371
SRR3591709Stem16.663
SRR3591710White floral bud10.386
SRR3591711White flower11.921
SRR3591712Green floral bud8.214
SRR3591713Yellow flower10.735
SRP173429 SRR8316895Juvenile bud stage 6.316
SRR8316896Juvenile bud stage 7.978
SRR8316897Juvenile bud stage 3.948
SRR8316894Third green stage 3.167
SRR8316900Third green stage 7.163
SRR8316901Third green stage 8.333
SRR8316898Complete white stage 3.047
SRR8316899Complete white stage 10.090
SRR8316903Complete white stage 6.646
SRR8316902Silver flowering stage5.376
SRR8316904Silver flowering stage7.940
SRR8316905Silver flowering stage3.599
SRR8316906Gold flowering stage 15.110
SRR8316907Gold flowering stage 12.819
SRR8316908Gold flowering stage 14.661
SRP132670SRR6706286Control7.181
SRR6706287Light intensity 50%6.895
SRR6706288Light intensity 20%6.806
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.485
CNS0095593Slightly white alabastrum(diploid) 29.576
CNS0095594Slightly white alabastrum(diploid) 36.334
CNS0095595Whole white alabastrum(diploid) 24.353
CNS0095596Whole white alabastrum(diploid) 33.848
CNS0095597Whole white alabastrum(diploid) 43.521
CNS0095598Silvery flower (diploied) 16.452
CNS0095599Silvery flower (diploied) 26.322
CNS0095600Silvery flower (diploied) 38.631
CNS0095601Golden flower (diploid) 17.313
CNS0095602Golden flower (diploid) 29.575
CNS0095603Golden flower (diploid) 38.810
CNS0095604Slightly white alabastrum(tetraploid) 16.404
CNS0095605Slightly white alabastrum(tetraploid) 24.582
CNS0095606Slightly white alabastrum(tetraploid) 311.650
CNS0095607Whole white alabastrum(tetraploid) 13.900
CNS0095608Whole white alabastrum(tetraploid) 22.750
CNS0095609Whole white alabastrum(tetraploid) 35.918
CNS0095610Silvery flower (tetraploid) 19.261
CNS0095611Silvery flower (tetraploid) 29.163
CNS0095612Silvery flower (tetraploid) 38.143
CNS0095613Golden flower (tetraploid) 15.744
CNS0095614Golden flower (tetraploid) 28.437
CNS0095615Golden flower (tetraploid) 38.468
CRA001975CRR073297Stem 17.556
CRR073298Stem 28.201
CRR073299Stem 34.916
CRR073300Leaf 18.219
CRR073301Leaf 27.455
CRR073302Leaf 35.884
CRR073303Juvenile bud 14.697
CRR073304Juvenile bud 22.845
CRR073305Juvenile bud 34.651
CRR073306Third green 11.629
CRR073307Third green 21.902
CRR073308Third green 32.030
CRR073309Second white 12.595
CRR073310Second white 23.183
CRR073311Second white 33.557
CRR073312Silver flowering 13.772
CRR073313Silver flowering 21.200
CRR073314Silver flowering 31.869
CRR073315Gold flowering 13.220
CRR073316Gold flowering 26.134
CRR073317Gold flowering 32.352
CRR073318Tawny withering 17.066
CRR073319Tawny withering 25.638
CRR073320Tawny withering 36.671