Detail information of GWHGAAZE007386


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU34407.18.6988E-116hypothetical protein MIMGU_mgv1a014384mg [Erythranthe guttata]
Swissprottr|Q9ZNS1|RS7_AVIMR3E-11440S ribosomal protein S7
trEMBLtr|A0A022R123|A0A022R123_ERYGU3E-116Uncharacterized protein {ECO:0000313|EMBL:EYU34407.1}
TAIR10AT3G02560.22E-86Ribosomal protein S7e family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene4419414344195863-
GWHAAZE00000002mRNA4419414344195863-
GWHAAZE00000002exon4419414344194262-
GWHAAZE00000002exon4419440944194663-
GWHAAZE00000002exon4419542344195546-
GWHAAZE00000002exon4419563044195703-
GWHAAZE00000002exon4419578944195863-
GWHAAZE00000002CDS4419578944195863-
GWHAAZE00000002CDS4419563044195703-
GWHAAZE00000002CDS4419542344195546-
GWHAAZE00000002CDS4419440944194663-
GWHAAZE00000002CDS4419414344194262-
Transcript Sequence

Network for GWHGAAZE007386

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01251.19Ribosomal_S7e7938.20E-30
PF01251.19Ribosomal_S7e1112111.10E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02993RP-S7e, RPS7 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412biological_processtranslation
GO:0005840cellular_componentribosome
GO:0003735molecular_functionstructural constituent of ribosome

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf620.405
SRR3591706second leaf193.762
SRR3591707mature leaf87.422
SRR3591708Shoot apex780.929
SRR3591709Stem283.263
SRR3591710White floral bud220.646
SRR3591711White flower241.373
SRR3591712Green floral bud585.343
SRR3591713Yellow flower145.155
SRP173429 SRR8316895Juvenile bud stage 281.172
SRR8316896Juvenile bud stage 383.674
SRR8316897Juvenile bud stage 232.670
SRR8316894Third green stage 168.892
SRR8316900Third green stage 580.699
SRR8316901Third green stage 546.364
SRR8316898Complete white stage 85.069
SRR8316899Complete white stage 496.106
SRR8316903Complete white stage 104.627
SRR8316902Silver flowering stage73.410
SRR8316904Silver flowering stage72.731
SRR8316905Silver flowering stage27.730
SRR8316906Gold flowering stage 82.544
SRR8316907Gold flowering stage 80.474
SRR8316908Gold flowering stage 114.758
SRP132670SRR6706286Control534.823
SRR6706287Light intensity 50%543.232
SRR6706288Light intensity 20%640.649
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1485.420
CNS0095593Slightly white alabastrum(diploid) 2571.387
CNS0095594Slightly white alabastrum(diploid) 3443.583
CNS0095595Whole white alabastrum(diploid) 2503.076
CNS0095596Whole white alabastrum(diploid) 3592.188
CNS0095597Whole white alabastrum(diploid) 4424.292
CNS0095598Silvery flower (diploied) 1233.496
CNS0095599Silvery flower (diploied) 2214.828
CNS0095600Silvery flower (diploied) 3156.811
CNS0095601Golden flower (diploid) 1194.951
CNS0095602Golden flower (diploid) 2157.310
CNS0095603Golden flower (diploid) 3155.098
CNS0095604Slightly white alabastrum(tetraploid) 1514.530
CNS0095605Slightly white alabastrum(tetraploid) 2518.525
CNS0095606Slightly white alabastrum(tetraploid) 3605.657
CNS0095607Whole white alabastrum(tetraploid) 1338.214
CNS0095608Whole white alabastrum(tetraploid) 2322.864
CNS0095609Whole white alabastrum(tetraploid) 3548.317
CNS0095610Silvery flower (tetraploid) 1143.404
CNS0095611Silvery flower (tetraploid) 2134.754
CNS0095612Silvery flower (tetraploid) 384.124
CNS0095613Golden flower (tetraploid) 153.606
CNS0095614Golden flower (tetraploid) 2107.705
CNS0095615Golden flower (tetraploid) 345.371
CRA001975CRR073297Stem 1483.349
CRR073298Stem 2491.668
CRR073299Stem 3546.826
CRR073300Leaf 1546.920
CRR073301Leaf 2588.535
CRR073302Leaf 3817.628
CRR073303Juvenile bud 1627.864
CRR073304Juvenile bud 2403.857
CRR073305Juvenile bud 3472.065
CRR073306Third green 139.498
CRR073307Third green 245.316
CRR073308Third green 356.777
CRR073309Second white 146.573
CRR073310Second white 240.391
CRR073311Second white 321.956
CRR073312Silver flowering 135.917
CRR073313Silver flowering 250.080
CRR073314Silver flowering 339.953
CRR073315Gold flowering 1164.132
CRR073316Gold flowering 2174.484
CRR073317Gold flowering 3177.592
CRR073318Tawny withering 1468.947
CRR073319Tawny withering 2371.241
CRR073320Tawny withering 3428.991