Detail information of GWHGAAZE007310


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007047665.17.2477E-58Basic helix-loop-helix DNA-binding superfamily protein, putative [Theobroma cacao]
Swissprottr|Q9T072|BH025_ARATH1E-41Transcription factor bHLH25
trEMBLtr|A0A061DHY3|A0A061DHY3_THECC3E-58Basic helix-loop-helix DNA-binding superfamily protein, putative {ECO:0000313|EMBL:EOX91822.1}
TAIR10AT2G22750.22E-25basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene4262544642627067-
GWHAAZE00000002mRNA4262544642627067-
GWHAAZE00000002exon4262544642625847-
GWHAAZE00000002exon4262629842626744-
GWHAAZE00000002exon4262703242627067-
GWHAAZE00000002CDS4262703242627067-
GWHAAZE00000002CDS4262629842626744-
GWHAAZE00000002CDS4262544642625847-
Transcript Sequence

Network for GWHGAAZE007310

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.27HLH1321791.50E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983molecular_functionprotein dimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.354
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.102
SRR3591709Stem8.084
SRR3591710White floral bud0.000
SRR3591711White flower0.598
SRR3591712Green floral bud0.069
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.049
SRR8316896Juvenile bud stage 0.083
SRR8316897Juvenile bud stage 0.439
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.057
SRR8316901Third green stage 0.120
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.159
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.025
SRR6706287Light intensity 50%0.028
SRR6706288Light intensity 20%0.088
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.085
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.000
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.075
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.132
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.077
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.085
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.253
CRR073298Stem 20.098
CRR073299Stem 30.409
CRR073300Leaf 10.311
CRR073301Leaf 20.168
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.153
CRR073306Third green 10.144
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.406
CRR073316Gold flowering 20.796
CRR073317Gold flowering 30.000
CRR073318Tawny withering 13.899
CRR073319Tawny withering 22.585
CRR073320Tawny withering 34.909