Detail information of GWHGAAZE007024


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003553436.10PREDICTED: probable protein kinase At2g41970-like [Glycine max]
Swissprottr|P93749|Y2197_ARATH0Probable protein kinase At2g41970
trEMBLtr|I1N9B1|I1N9B1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G33180.1}
TAIR10AT2G41970.14E-161Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000002gene3648784036492729-
GWHAAZE00000002mRNA3648784036492729-
GWHAAZE00000002exon3648784036487956-
GWHAAZE00000002exon3648899736489083-
GWHAAZE00000002exon3648921036489333-
GWHAAZE00000002exon3649052236490795-
GWHAAZE00000002exon3649167436491800-
GWHAAZE00000002exon3649210836492364-
GWHAAZE00000002exon3649263036492729-
GWHAAZE00000002CDS3649263036492729-
GWHAAZE00000002CDS3649210836492364-
GWHAAZE00000002CDS3649167436491800-
GWHAAZE00000002CDS3649052236490795-
GWHAAZE00000002CDS3648921036489333-
GWHAAZE00000002CDS3648899736489083-
GWHAAZE00000002CDS3648784036487956-
Transcript Sequence

Network for GWHGAAZE007024

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr793493.00E-45
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIII

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding
GO:0004713molecular_functionprotein tyrosine kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.428
SRR3591706second leaf3.616
SRR3591707mature leaf6.224
SRR3591708Shoot apex3.581
SRR3591709Stem1.275
SRR3591710White floral bud181.221
SRR3591711White flower8.548
SRR3591712Green floral bud114.773
SRR3591713Yellow flower5.442
SRP173429 SRR8316895Juvenile bud stage 4.101
SRR8316896Juvenile bud stage 13.586
SRR8316897Juvenile bud stage 5.889
SRR8316894Third green stage 8.299
SRR8316900Third green stage 74.061
SRR8316901Third green stage 67.250
SRR8316898Complete white stage 0.293
SRR8316899Complete white stage 1.545
SRR8316903Complete white stage 0.732
SRR8316902Silver flowering stage1.928
SRR8316904Silver flowering stage3.939
SRR8316905Silver flowering stage2.071
SRR8316906Gold flowering stage 0.943
SRR8316907Gold flowering stage 0.690
SRR8316908Gold flowering stage 0.321
SRP132670SRR6706286Control46.269
SRR6706287Light intensity 50%50.406
SRR6706288Light intensity 20%47.088
CNP0000432CNS0095592Slightly white alabastrum(diploid) 156.727
CNS0095593Slightly white alabastrum(diploid) 254.818
CNS0095594Slightly white alabastrum(diploid) 359.780
CNS0095595Whole white alabastrum(diploid) 2184.121
CNS0095596Whole white alabastrum(diploid) 3203.880
CNS0095597Whole white alabastrum(diploid) 4247.126
CNS0095598Silvery flower (diploied) 15.949
CNS0095599Silvery flower (diploied) 224.174
CNS0095600Silvery flower (diploied) 36.405
CNS0095601Golden flower (diploid) 19.709
CNS0095602Golden flower (diploid) 26.521
CNS0095603Golden flower (diploid) 35.890
CNS0095604Slightly white alabastrum(tetraploid) 1119.299
CNS0095605Slightly white alabastrum(tetraploid) 2140.447
CNS0095606Slightly white alabastrum(tetraploid) 34.225
CNS0095607Whole white alabastrum(tetraploid) 1285.087
CNS0095608Whole white alabastrum(tetraploid) 2331.665
CNS0095609Whole white alabastrum(tetraploid) 3152.330
CNS0095610Silvery flower (tetraploid) 17.542
CNS0095611Silvery flower (tetraploid) 222.187
CNS0095612Silvery flower (tetraploid) 344.144
CNS0095613Golden flower (tetraploid) 16.999
CNS0095614Golden flower (tetraploid) 24.458
CNS0095615Golden flower (tetraploid) 322.389
CRA001975CRR073297Stem 110.395
CRR073298Stem 28.787
CRR073299Stem 36.063
CRR073300Leaf 172.524
CRR073301Leaf 234.871
CRR073302Leaf 323.922
CRR073303Juvenile bud 151.680
CRR073304Juvenile bud 233.686
CRR073305Juvenile bud 35.086
CRR073306Third green 123.809
CRR073307Third green 223.545
CRR073308Third green 322.496
CRR073309Second white 13.564
CRR073310Second white 27.562
CRR073311Second white 37.287
CRR073312Silver flowering 125.435
CRR073313Silver flowering 227.246
CRR073314Silver flowering 311.990
CRR073315Gold flowering 130.826
CRR073316Gold flowering 28.713
CRR073317Gold flowering 310.203
CRR073318Tawny withering 124.129
CRR073319Tawny withering 227.889
CRR073320Tawny withering 321.201